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Protein Overview: gi|165914176, gi...

General Information:
Name(s) found: gi|89102796 [NCBI NR]
gi|165937764 [NCBI NR]
gi|165914176 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|89102796|ref|ZP_01175405.1| COG0458: Carbamoylphosphate synthase large subunit (split gene in MJ) [Yersinia pestis biovar Orientalis str. IP275] [NCBI NR]
  • gi|165937764|ref|ZP_02226325.1| carbamoyl-phosphate synthase, large subunit [Yersinia pestis biovar Orientalis str. IP275] [NCBI NR]
  • gi|165914176|gb|EDR32792.1| carbamoyl-phosphate synthase, large subunit [Yersinia pestis biovar Orientalis str. IP275] [NCBI NR]
    • Organism: Yersinia pestis biovar Orientalis str. IP275
    Length: 1077 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN LATIMTDPEM  60
   61 ADATYIEPIH WEVVRKIIEK ERPDAVLPTM GGQTALNCAL ELERQGVLAE FGVTMIGATA 120
  121 DAIDKAEDRR RFDIAMKKIG LDTARSGIAH NMEEALAVAA DVGFPCIIRP SFTMGGTGGG 180
  181 IAYNREEFEE ICERGLDLSP TKELLIDESL IGWKEYEMEV VRDKNDNCII VCSIENFDAM 240
  241 GIHTGDSITV APAQTLTDKE YQIMRNASMA VLREIGVETG GSNVQFSVNP KNGRLIVIEM 300
  301 NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDELMNDIT GGRTPASFEP SIDYVVTKIP 360
  361 RFNFEKFAGA NDRLTTQMKS VGEVMAIGRT QQESLQKALR GLEVGATGFD PKVSLDDPEA 420
  421 LTKIRRELKE AGAERIWYIA DAFRAGMSVD GVFNLTNVDR WFLVQIEELV RLEESVAELG 480
  481 INGLTAEFMR HLKRKGFADA RLAKLVGAAE SEVRKLRYKY GLHPVYKRVD TCAAEFSTDT 540
  541 AYMYSTYEEE CESNPTSDRP KVMVLGGGPN RIGQGIEFDY CCVHASLALR EDGYETIMVN 600
  601 CNPETVSTDY DTSDRLYFES VTLEDVLEIV RIEKPQGVIV QYGGQTPLKL ARELEAAGVP 660
  661 IIGTSPDAID RAEDRERFQQ AVNRLGLKQP ANATVATIEQ AVEKATGLGY PLVVRPSYVL 720
  721 GGRAMEIVYD EIDLRRYFQN AVSVSNDAPV LLDRFLDDAV EVDVDAICDG ERVLIGGIME 780
  781 HIEQAGVHSG DSACSLPAYT LSKEIQDVMR QQVEKLAFEL CVRGLMNVQF AVKNNEVYLI 840
  841 EVNPRAARTV PFVSKATGMP LAKIAARVMV GQSLAEQGML EEIIPPYYSV KEVVLPFNKF 900
  901 PGVDPILGPE MRSTGEVMGV GRTFAEAFSK AMLGSQSGMK KSGRALLSVR EGDKHRVVDL 960
  961 AAKLLKQGFE LDATHGTAVV LGEAGINPRL VNKVHEGRPH IQDRIKNGEY TYIVNTTAGR1020
 1021 QAIEDSKLIR RSALQYKVHY DTTLNGGFAT AMALNADPTD QVISVQEMHA KIKNMKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..1077] PSI-BLAST 1000.0 Carbamoyl phosphate synthetase, large subunit connection domain; Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain; Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains; Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • carbamoyl-phosphate synthase activity
    		•  10.3961907577933 bayes_pls_golite062009
  • carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
    		•  10.3817460390594 bayes_pls_golite062009
  • carbon-nitrogen ligase activity, with glutamine as amido-N-donor
    		•  7.55690629692775 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  6.95559501787172 bayes_pls_golite062009
  • ligase activity
    		•  1.91091941710895 bayes_pls_golite062009
  • phosphoribosylaminoimidazole carboxylase activity
    		•  1.57708889650281 bayes_pls_golite062009
  • catalytic activity
    		•  1.08688404807699 bayes_pls_golite062009
  • phosphoribosylamine-glycine ligase activity
    		•  1.04915286326924 bayes_pls_golite062009
  • carbon-oxygen lyase activity, acting on phosphates
    		•  0.964679554894316 bayes_pls_golite062009
  • phosphoribosylaminoimidazolecarboxamide formyltransferase activity
    		•  0.898425265043358 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  0.730894973410499 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  0.482425669839603 bayes_pls_golite062009
  • lyase activity
    		•  0.432948879967458 bayes_pls_golite062009
  • hydroxymethyl-, formyl- and related transferase activity
    		•  0.2431211195117 bayes_pls_golite062009
  • glutathione synthase activity
    		•  0.0685848191991462 bayes_pls_golite062009
  • biotin carboxylase activity
    		•  0.0172732430077291 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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