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Protein Overview: gi|13359634, gi|...

General Information:
Name(s) found: gi|15829432 [NCBI NR]
gi|13359634 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|15829432|ref|NP_308205.1| zinc metallopeptidase RseP [Escherichia coli O157:H7 str. Sakai] [NCBI NR]
  • gi|13359634|dbj|BAB33601.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] [NCBI NR]
    • Organism: Escherichia coli O157:H7 str. Sakai
    Length: 450 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSFLWDLAS FIVALGVLIT VHEFGHFWVA RRCGVRVERF SIGFGKALWR RTDKLGTEYV  60
   61 IALIPLGGYV KMLDERAEPV VPELRHHAFN NKSVGQRAAI IAAGPVANFI FAIFAYWLVF 120
  121 IIGVPGVRPV VGEIAANSIA AEAQIAPGTE LKAVDGIETP DWDAVRLQLV DKIGDESTTI 180
  181 TVAPFGSDQR RDVKLDLRHW AFEPDKEDPV SSLGIRPRGP QIEPVLENVQ PNSAASKAGL 240
  241 QAGDRIVKVD GQPLTQWVTF VMLVRDNPGK SLALEIERQG SPLSLTLIPE SKPGNGKAIG 300
  301 FVGIEPKVIP LPDEYKVVRQ YGPFNAIVEA TDKTWQLMKL TVSMLGKLIT GDVKLNNLSG 360
  361 PISIAKGAGM TAELGVVYYL PFLALISVNL GIINLFPLPV LDGGHLLFLA IEKIKGGPVS 420
  421 ERVQDFCYRI GSILLVLLMG LALFNDFSRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..382] PSI-BLAST 26.09691 Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain
    2 View Details [383..450] MSA 2.552997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  4.77028935267086 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  4.38506541212306 bayes_pls_golite062009
  • endopeptidase activity
    		•  3.78841204092284 bayes_pls_golite062009
  • serine hydrolase activity
    		•  3.40985043278892 bayes_pls_golite062009
  • serine-type peptidase activity
    		•  3.40724860044542 bayes_pls_golite062009
  • hydrolase activity
    		•  3.15103157395079 bayes_pls_golite062009
  • serine-type endopeptidase activity
    		•  3.13486560415684 bayes_pls_golite062009
  • catalytic activity
    		•  1.40927913545237 bayes_pls_golite062009
  • receptor activity
    		•  0.165051160476865 bayes_pls_golite062009
  • protein domain specific binding
    		•  0.0675941009743699 bayes_pls_golite062009
  • protein binding
    		•  0.0013332686405948 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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