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Protein Overview: gi|13363027, gi|...

General Information:
Name(s) found: gi|15832810 [NCBI NR]
gi|13363027 [NCBI NR]
Description(s) found:
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  • gi|15832810|ref|NP_311583.1| recombinase A [Escherichia coli O157:H7 str. Sakai] [NCBI NR]
  • gi|13363027|dbj|BAB36979.1| RecA protein [Escherichia coli O157:H7 str. Sakai] [NCBI NR]
  • RecA protein [Escherichia coli O157:H7 str. Sakai] [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • recombinase A [Escherichia coli O157:H7 str. Sakai] [nr-271106-contam.fasta]
    • Organism: Escherichia coli O157:H7 str. Sakai
    Length: 353 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIDENKQKA LAAALGQIEK QFGKGSIMRL GEDRSMDVET ISTGSLSLDI ALGAGGLPMG  60
   61 RIVEIYGPES SGKTTLTLQV IAAAQREGKT CAFIDAEHAL DPIYARKLGV DIDNLLCSQP 120
  121 DTGEQALEIC DALARSGAVD VIVVDSVAAL TPKAEIEGEI GDSHMGLAAR MMSQAMRKLA 180
  181 GNLKQSNTLL IFINQIRMKI GVMFGNPETT TGGNALKFYA SVRLDIRRIG AVKEGENVVG 240
  241 SETRVKVVKN KIAAPFKQAE FQILYGEGIN FYGELVDLGV KEKLIEKAGA WYSYKGEKIG 300
  301 QGKANATAWL KDNPETAKEI EKKVRELLLS NPNSTPDFSV DDSEGVAETN EDF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..353] PSI-BLAST 114.0 Crystal Structure of E. Coli RecA in a Compressed Helical Filament Form 2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleoside-triphosphatase activity
    		•  1.5002869400376 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.49611313354225 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  1.47468810672455 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  1.47371190790284 bayes_pls_golite062009
  • binding
    		•  1.41264401383678 bayes_pls_golite062009
  • hydrolase activity
    		•  1.29419296935491 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • ATPase activity
    		•  0.844502974582959 bayes_pls_golite062009
  • DNA-dependent ATPase activity
    		•  0.510757066819002 bayes_pls_golite062009
  • helicase activity
    		•  0.51056840156051 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.360529478474946 bayes_pls_golite062009
  • nucleotide binding
    		•  0.354857598792381 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.35235724478784 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.352298062690593 bayes_pls_golite062009
  • protein binding
    		•  0.231495635179652 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.216266069700019 bayes_pls_golite062009
  • DNA helicase activity
    		•  0.148854929640752 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle