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Protein Overview: CTDS1_MOUSE

General Information:
Name(s) found: CTDS1_MOUSE [Swiss-Prot]
Description(s) found:
Found 37 descriptions.
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  • Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Mus musculus GN=Ctdsp1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Mus musculus
    Length: 261 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSAVITQI SKEEARGPLR GKGDQKSAVS QKPRSRGILH SLFCCVCRDD GEPLPAHSGA  60
   61 PLLVEENGAI PKHTPVQYLL PEAKAQDSDK ICVVIDLDET LVHSSFKPVN NADFIIPVEI 120
  121 DGVVHQVYVL KRPHVDEFLQ RMGELFECVL FTASLAKYAD PVADLLDKWG AFRARLFRES 180
  181 CVFHRGNYVK DLSRLGRDLR RVLILDNSPA SYVFHPDNAV PVASWFDNMS DTELHDLLPF 240
  241 FEQLSRVDDV YSVLRQPRPG S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..72] MSA 1.174997 View MSA. No confident structure predictions are available.
    2 View Details [73..261] PSI-BLAST 65.522879 Three-dimensional structure of a RNA-polymerase II binding protein with associated ligand.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • hydrolase activity
    		•  1.47320207089721 bayes_pls_golite062009
  • catalytic activity
    		•  1.01036457072229 bayes_pls_golite062009
  • binding
    		•  0.94971260438956 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.361621573920296 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.290412096949025 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.270489787263307 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.268673530091746 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.138050287397444 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.00945939738917856 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.00340058324101489 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle