YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|115487074, gi...

General Information:
Name(s) found: gi|222616532 [NCBI NR]
gi|215704608 [NCBI NR]
gi|115487074 [NCBI NR]
gi|113648531 [NCBI NR]
gi|108862112 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|222616532|gb|EEE52664.1| hypothetical protein OsJ_35038 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215704608|dbj|BAG94236.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115487074|ref|NP_001066024.1| Os12g0121300 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113648531|dbj|BAF29043.1| Os12g0121300 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108862112|gb|ABA95682.2| Cytidylyltransferase family protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • Os12g0121300 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • Cytidylyltransferase family protein, expressed [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 424 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAGAGSSSA KLVAACVIGG IVLGASVVAL HLAGPVAIPA LPPVDALRRR FRRGRRRPVR  60
   61 VYMDGCFDMM HYGHCNALRQ AHALGDELIV GVVSDDEITA NKGPPVTPLH ERLIMVRAVK 120
  121 WVHDVIPDAP YAITEDFMNK LFNEYNIDYI IHGDDPCLLP DGTDAYALAK KVGRYKQIKR 180
  181 TEGVSTTDIV GRMLLCVRER SASDSHNHSS LQRQFSHGHG QKIDDSGSGS GTRISHFLPT 240
  241 SRRIVQFSNS RGPGPDSRIV YIDGAFDLFH AGHVEILRLA RELGDFLLVG IHTDQTISST 300
  301 RGPHRPIMNL HERSLSVLAC RYVDEVIIGA PWDVSKDMIT TFNISLVVHG TIAENMDFMK 360
  361 DDLNPYAVPR AMGIYRRLES PLDITTSTII RRIVANHEAY QKRNEKKEAS EKKYYDSKSF 420
  421 VNGE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..56] MSA 7.082996 View MSA. No confident structure predictions are available.
    2 View Details [57..220] PSI-BLAST 32.69897 CTP:glycerol-3-phosphate cytidylyltransferase
    3 View Details [221..424] FFAS03 5.84 No description for 2b7lA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • ligase activity, forming carbon-oxygen bonds
    		•  3.78648093277891 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  3.78648093277891 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  3.77519125450118 bayes_pls_golite062009
  • ligase activity
    		•  2.69963581983481 bayes_pls_golite062009
  • catalytic activity
    		•  2.37674226834122 bayes_pls_golite062009
  • ethanolamine-phosphate cytidylyltransferase activity
    		•  2.31031486896772 bayes_pls_golite062009
  • glutamate-tRNA ligase activity
    		•  0.993808666373194 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.911644628339304 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  0.774843857641774 bayes_pls_golite062009
  • binding
    		•  0.520077014845626 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  0.427749234863188 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.42131487486996 bayes_pls_golite062009
  • methionine-tRNA ligase activity
    		•  0.376417381080717 bayes_pls_golite062009
  • tyrosine-tRNA ligase activity
    		•  0.257183459378457 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle