| Protein: | gi|115487074, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 424 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115487074, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
368.0 | [0..10] | [424..8] |
|
Region A: Residues: [1-56] |
1 11 21 31 41 51
| | | | | |
1 MEAGAGSSSA KLVAACVIGG IVLGASVVAL HLAGPVAIPA LPPVDALRRR FRRGRR
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [57-220] |
1 11 21 31 41 51
| | | | | |
1 RPVRVYMDGC FDMMHYGHCN ALRQAHALGD ELIVGVVSDD EITANKGPPV TPLHERLIMV 60
61 RAVKWVHDVI PDAPYAITED FMNKLFNEYN IDYIIHGDDP CLLPDGTDAY ALAKKVGRYK 120
121 QIKRTEGVST TDIVGRMLLC VRERSASDSH NHSSLQRQFS HGHG
|
| Detection Method: | |
| Confidence: | 32.69897 |
| Match: | 1cozA |
| Description: | CTP:glycerol-3-phosphate cytidylyltransferase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming carbon-oxygen bonds | 3.78648093277891 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 3.78648093277891 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 3.77519125450118 | bayes_pls_golite062009 |
| ligase activity | 2.69963581983481 | bayes_pls_golite062009 |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| ethanolamine-phosphate cytidylyltransferase activity | 2.31031486896772 | bayes_pls_golite062009 |
| glutamate-tRNA ligase activity | 0.993808666373194 | bayes_pls_golite062009 |
| nucleic acid binding | 0.911644628339304 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.774843857641774 | bayes_pls_golite062009 |
| binding | 0.520077014845626 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.427749234863188 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.42131487486996 | bayes_pls_golite062009 |
| methionine-tRNA ligase activity | 0.376417381080717 | bayes_pls_golite062009 |
| tyrosine-tRNA ligase activity | 0.257183459378457 | bayes_pls_golite062009 |
|
Region A: Residues: [221-424] |
1 11 21 31 41 51
| | | | | |
1 QKIDDSGSGS GTRISHFLPT SRRIVQFSNS RGPGPDSRIV YIDGAFDLFH AGHVEILRLA 60
61 RELGDFLLVG IHTDQTISST RGPHRPIMNL HERSLSVLAC RYVDEVIIGA PWDVSKDMIT 120
121 TFNISLVVHG TIAENMDFMK DDLNPYAVPR AMGIYRRLES PLDITTSTII RRIVANHEAY 180
181 QKRNEKKEAS EKKYYDSKSF VNGE
|
| Detection Method: | |
| Confidence: | 5.84 |
| Match: | 2b7lA |
| Description: | No description for 2b7lA was found. |
