YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115487074, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAGAGSSSA KLVAACVIGG IVLGASVVAL HLAGPVAIPA LPPVDALRRR FRRGRRRPVR  60
   61 VYMDGCFDMM HYGHCNALRQ AHALGDELIV GVVSDDEITA NKGPPVTPLH ERLIMVRAVK 120
  121 WVHDVIPDAP YAITEDFMNK LFNEYNIDYI IHGDDPCLLP DGTDAYALAK KVGRYKQIKR 180
  181 TEGVSTTDIV GRMLLCVRER SASDSHNHSS LQRQFSHGHG QKIDDSGSGS GTRISHFLPT 240
  241 SRRIVQFSNS RGPGPDSRIV YIDGAFDLFH AGHVEILRLA RELGDFLLVG IHTDQTISST 300
  301 RGPHRPIMNL HERSLSVLAC RYVDEVIIGA PWDVSKDMIT TFNISLVVHG TIAENMDFMK 360
  361 DDLNPYAVPR AMGIYRRLES PLDITTSTII RRIVANHEAY QKRNEKKEAS EKKYYDSKSF 420
  421 VNGE

Type	Start	End	Confidence
Signal Peptide	1	29	0.47
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	424	0.96