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Protein Overview: gi|109493573, gi...

General Information:
Name(s) found: gi|109494716 [NCBI NR]
gi|109493573 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|109494716|ref|XP_001061952.1| PREDICTED: similar to T-box 1 [Rattus norvegicus] [NCBI NR]
  • gi|109493573|ref|XP_341010.3| PREDICTED: similar to T-box 1 [Rattus norvegicus] [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 600 amino acids

    Gene Ontology:
    Cellular Component: nucleus [UNKNOWN][IEA]
    cellular_component [ND]
    Biological Process: cell proliferation [UNKNOWN]
    soft palate development [UNKNOWN]
    mesoderm development [UNKNOWN]
    anterior/posterior pattern formation [UNKNOWN]
    outer ear morphogenesis [UNKNOWN]
    middle ear morphogenesis [UNKNOWN]
    positive regulation of transcription [UNKNOWN]
    blood vessel morphogenesis [UNKNOWN]
    positive regulation of transcription from RNA polymerase II promoter [UNKNOWN]
    thymus development [UNKNOWN]
    sensory perception of sound [UNKNOWN]
    heart development [UNKNOWN]
    heart morphogenesis [UNKNOWN]
    blood vessel development [UNKNOWN]
    angiogenesis [UNKNOWN]
    positive regulation of transcription, DNA-dependent [UNKNOWN]
    cell fate specification [UNKNOWN]
    social behavior [UNKNOWN]
    biological_process [ND]
    regulation of transcription, DNA-dependent [IEA]
    pattern specification process [UNKNOWN]
    embryonic cranial skeleton morphogenesis [UNKNOWN]
    artery morphogenesis [UNKNOWN]
    pharyngeal system development [UNKNOWN]
    determination of left/right symmetry [UNKNOWN]
    parathyroid gland development [UNKNOWN]
    embryonic viscerocranium morphogenesis [UNKNOWN]
    muscle organ development [UNKNOWN]
    blood vessel remodeling [UNKNOWN]
    thyroid gland development [UNKNOWN]
    neural crest cell migration [UNKNOWN]
    ear morphogenesis [UNKNOWN]
    inner ear morphogenesis [UNKNOWN]
    Molecular Function: transcription factor activity [UNKNOWN][IEA]
    protein homodimerization activity [UNKNOWN]
    sequence-specific DNA binding [UNKNOWN]
    transcription activator activity [UNKNOWN]
    molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTERARGAW VPAEAATRGL GAGKSAEPPA SPQLPAPAKV ELPPLRLGDS RASLSRALRQ  60
   61 SRRGRAAEPL TAKVEAPPAG GARQKGETAG AAEASEGTAH RGPRPSDRAK LRRLPGSPAG 120
  121 MHFSTVTRDM EAFAASSLSG LGAPSPGADP FGPREPPPPR YDPCTAAPGA PGPPPPPRAY 180
  181 PFAPAPGAAS SSAAESEGPG ASRAAAAKAP VKKNPKVASV SVQLEMKALW DEFNQLGTEM 240
  241 IVTKAGRRMF PTFQVKLFGM DPMADYMLLM DFVPVDDKRY RYAFHSSSWL VAGKADPATP 300
  301 GRVHYHPDSP AKGAQWMKQI VSFDKLKLTN NLLDDNGHII LNSMHRYQPR FHVVYVDPRK 360
  361 DSEKYAEENF KTFVFEETRF TAVTAYQNHR ITQLKIASNP FAKGFRDCDP EDWPRNHRPG 420
  421 ALPLVSAFAR SRNPVASPTQ PNGADKDVAE ARREFDRDSG PAALGDATHP PQLLARVLSP 480
  481 ALPGPGGLVP LPGGSGGRHS PPHADLRLEA PGASEPLHHH PYKYPAAAYD HYLGAKSRPA 540
  541 PYPLPGLRGH GYHPHAHPHA HPHHHHHPAV NPAAAAAAAA AANVYSSAAA PPGAYDYCPR 600
  601

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle