Protein Overview: gi|109476885

General Information:
Name(s) found:	gi\|109476885 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|109476885\|ref\|XP_001060286.1\| PREDICTED: similar to zinc finger, CCHC domain containing 11 isoform c isoform 2 [Rattus norvegicus] [NCBI NR] PREDICTED: similar to zinc finger, CCHC domain containing 11 isoform c isoform 2 [Rattus norvegicus] [nr-271106-contam.fasta]
Organism:	Rattus norvegicus
Length:	1647 amino acids
Gene Ontology:
Cellular Component:	nucleus [UNKNOWN] cytoplasm [UNKNOWN]
Biological Process:	stem cell maintenance [UNKNOWN] pre-microRNA processing [UNKNOWN] negative regulation of NF-kappaB transcription factor activity [UNKNOWN] [NOT]histone mRNA catabolic process [UNKNOWN] RNA 3'-end processing [UNKNOWN] cytokine production [UNKNOWN] miRNA catabolic process [UNKNOWN] regulation of lipopolysaccharide-mediated signaling pathway [UNKNOWN]
Molecular Function:	nucleic acid binding [IEA] RNA uridylyltransferase activity [UNKNOWN] zinc ion binding [IEA] nucleotidyltransferase activity [IEA] protein binding [UNKNOWN]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEPKTSKNE NHEPKKNIIC EESKAVKIIT NQTLKPRNDK SMTEIGTSSL NRNSSKKTKQ  60
   61 NDICIEKTEA KSCKVNAASV PGPKDLGLVL RDQSHCKVKK LPNSPMKAQK GSSQTKLEKA 120
  121 PSLQAKAEKV PKSPNLPVKV EKTPCTTAAA TTEKALNSQR KEENVPTSQM KLQKTPRSPL 180
  181 EPENVPSLLL KENVKQTESQ QTGKKLTSSF VSMDKRNSAA LQGEKSTLEN SSLSQKQQTQ 240
  241 ADNIADSDDS ASGMEDTSDD LSKMKNEESN KENSSEMDYL ENATVIDEST LTPEQKLGLK 300
  301 QAEERLERDH IFRLEKRSPE YTNCRYLCKL CLIHIENIQG AHKHIKEKRH KKNILEKQEE 360
  361 SELRSLPSPS PAHLAALSVA VVELAKEQGI TDDDLRIRQD IVEEMSKVIV TFLPECSLRL 420
  421 YGSSLTKFAL KSSDVNIDIK FPPKMNHPDL LIQVLGILKK SALYVDVESD FHAKVPVVVC 480
  481 KDRKSGLLCR VSAGNDMACL TTDLLAALGK VEPVFTPLVL AFRYWAKVSG TEENKSSFFF 540
  541 AVNLPLKSNL SPSFPPSLPS SLLVLIYLSG CVLIRRDPFS SNDSIHKNTV KWSYNKLGYT 600
  601 VKSCIKEVGM CAGDSPKKKK KKKKLKHIMD FVVKLCGKSP LTLEAPNQVP LGQLWLELLK 660
  661 FYTLDFALEE YVICVRIQDI LTRENKNWPK RRIAIEDPFS VKRNVARSLN SQLVYEYVVE 720
  721 RFRAAYRYFA CPQRKGGNKS TVDLKKKEKG KLSNKKPVKS DCSATNGCVL GESTEKVNME 780
  781 RGQPLKHDEM EFTSQRCIVD NDRLLVNELG LADHGQDSSS LSTGSEGSEL QQKSAEKQGD 840
  841 LTPSETSLKK ELSQCHCTGT PDGAGSAGTD CRSNLEMESS HQIVCNNISA TSCNCKATEV 900
  901 ASDLIDDDNL PSQELYYVFD KFILTSGKPP TIVCSICKKD GHSKNDCPED FRKIDLKPLP 960
  961 PMTNRFREIL DLVCKRCFDE LSPPCSEQHN REQILIGLEK FIQKEYDEKA RLCLFGSSKN1020
 1021 GFGFRDSDLD ICMTLEGHEN AEKLNCKEII ENLAKILKRH PGLRNILPIT TAKVPIVKFE1080
 1081 HRRSGLEGDI SLYNTLAQHN TRMLATYAAI DPRVQYLGYT MKVFAKRCDI GDASRGSLSS1140
 1141 YAYILMVLYF LQQRKPPVIP VLQEIFDGKQ IPQRMVDGWN AFFFDKTEEL KKRLPSLGKN1200
 1201 TESLGELWLG LLRFYTEEFD FKEYVISIRQ KKLLTTFEKQ WTSKCIAIED PFDLNHNLGA1260
 1261 GVSRKMTNFI MKAFINGRKL FGTPFYPLIG REAEYFFDSR VLTDGELAPN DRCCRVCGKI1320
 1321 GHYMKDCPKR KRLKKKDSEE EKEGNEEEKD SRDLLDSRDL RCFICGDAGH VRRECPEVKM1380
 1381 ARQRNSSVAA AQLVRNLVNA QQVAGSAQQQ SDQSIRTRQS SECSDSPSYS PQPQPFPQNS1440
 1441 PQPSALPPPP SQPGSQPKLG PPQQGGQPPH QVQMPLYNFP PSPPAHYSPM HGMGLLPMHP1500
 1501 LQIPAPSWPI HGPMLHSAPG STPSNIGLND PSIIFAQPAA RPMAIPSSSH DGHWPRTVAP1560
 1561 NSLVNNGAVG NSEPRFRGLN PPIPWEHAPR PHFPLVPASW PYGLHQNFMH QGNPRFQPKP1620
 1621 FYAQAERCAT RRSRERCPHP PRGNVSE

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Protein Overview: gi|109476885

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: