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Protein Overview: gi|125602814, gi...

General Information:
Name(s) found: gi|215767849 [NCBI NR]
gi|125602814 [NCBI NR]
gi|115475666 [NCBI NR]
gi|113623398 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|215767849|dbj|BAH00078.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125602814|gb|EAZ42139.1| hypothetical protein OsJ_26699 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115475666|ref|NP_001061429.1| Os08g0274700 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113623398|dbj|BAF23343.1| Os08g0274700 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 194 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGYYDIDDI LMEEEPISVV FQVSANGVGL LDPGAERNSV EKGAKVDLPF WLAHGLLSLE  60
   61 QAVSINVPPC FTQKTRKEIQ ADAACVDLRI RCPYFYELGC KIVPLVNDRS IGLFLRYAFT 120
  121 SRYKEILSKS HSSSMMTVPK FVPRLTKEEA QVFESARDSM TAFKKWRAGG VRLQKASILG 180
  181 RKRKTKLPDG PSAP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..194] PSI-BLAST 63.0 No description for 2q9qD was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3'-5' DNA helicase activity
    		•  3.30007058745861 bayes_pls_golite062009
  • DNA helicase activity
    		•  2.7662250039458 bayes_pls_golite062009
  • binding
    		•  1.27082628880017 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.2336233528067 bayes_pls_golite062009
  • helicase activity
    		•  1.2110072302388 bayes_pls_golite062009
  • transcription elongation regulator activity
    		•  0.37490315580617 bayes_pls_golite062009
  • catalytic activity
    		•  0.161911144249814 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle