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View Structure Prediction Details

Protein: gi|125602814, gi...
Organism: Oryza sativa Japonica Group
Length: 194 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125602814, gi....

Description E-value Query
Range
Subject
Range
gi|166796963, gi... - gi|62859339|ref|NP_001016123.1| hypothetical protein LOC548877 [Xenopus (Silurana) tropicalis], gi|1...
238.0 [0..3] [191..17]

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Predicted Domain #1
Region A:
Residues: [1-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGYYDIDDI LMEEEPISVV FQVSANGVGL LDPGAERNSV EKGAKVDLPF WLAHGLLSLE  60
   61 QAVSINVPPC FTQKTRKEIQ ADAACVDLRI RCPYFYELGC KIVPLVNDRS IGLFLRYAFT 120
  121 SRYKEILSKS HSSSMMTVPK FVPRLTKEEA QVFESARDSM TAFKKWRAGG VRLQKASILG 180
  181 RKRKTKLPDG PSAP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.0
Match: 2q9qD
Description: No description for 2q9qD was found.

Predicted functions:

Term Confidence Notes
3'-5' DNA helicase activity 3.30007058745861 bayes_pls_golite062009
DNA helicase activity 2.7662250039458 bayes_pls_golite062009
binding 1.27082628880017 bayes_pls_golite062009
transcription regulator activity 1.2336233528067 bayes_pls_golite062009
helicase activity 1.2110072302388 bayes_pls_golite062009
transcription elongation regulator activity 0.37490315580617 bayes_pls_golite062009
catalytic activity 0.161911144249814 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle