YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|115486425, gi...

General Information:
Name(s) found: gi|215697099 [NCBI NR]
gi|115486425 [NCBI NR]
gi|113645578 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|215697099|dbj|BAG91093.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115486425|ref|NP_001068356.1| Os11g0642800 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113645578|dbj|BAF28719.1| Os11g0642800 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 540 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSYVTTPHH HHHHGCCSGS RRLQAPAPPA RPRLVVAAAA RHVALPPRRA VASRAMSAEA  60
   61 PLGVAPAAAE EEMAAVVDEM AEEAAVWCAV HGLVVGDRAE PRSGTIPGVG LVHAPFALLP 120
  121 TRFPASFWKQ ARELAPIFND LVDRVSLDGE FLQDSLSRTR QVDDFTSRLL DIHAKMMEVN 180
  181 KEEDIRLGLH RSDYMLDSGT NSLLQIELNT ISSSFPGLSS LVSELHRTLL NRHGKVLGLD 240
  241 SKRIPQNWAA TQFAEALSMA WTEFNNKSAV IMMVVQPEER NMYDQYWLIN HLKESHGVKT 300
  301 IRKTLAQVEA EGQVLPDGTL VVDGQTVSVV YFRAGYSPND YPSEAEWRAR LLMEQSSAIK 360
  361 CPSISYHLVG TKKIQQELAK PNILERFLNN KEDIAKLRKC FAGLWSLDNE EIVKTAIEKP 420
  421 DLFVLKPQRE GGGNNIYGYD LRETLVRLQK EQGEALAAYI LMQRIFPRAS LTHLVQGGVC 480
  481 FEDLTISELG IFGAYLRNKD KVVLNNQCGY LMRTKVSSSN EGGVAAGFAV LDSILLTDEW 540
  541

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..540] PSI-BLAST 1000.0 Eukaryotic glutathione synthetase, substrate-binding domain; Eukaryotic glutathione synthetase ATP-binding domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • glutathione binding
    		•  3.43434843798286 bayes_pls_golite062009
  • ligase activity
    		•  3.25077459445999 bayes_pls_golite062009
  • glutathione synthase activity
    		•  3.18460876432532 bayes_pls_golite062009
  • catalytic activity
    		•  2.5009559386228 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  1.59015373957506 bayes_pls_golite062009
  • succinate-CoA ligase activity
    		•  1.52785506428706 bayes_pls_golite062009
  • CoA carboxylase activity
    		•  1.44257510787161 bayes_pls_golite062009
  • ligase activity, forming carbon-sulfur bonds
    		•  0.935432886482705 bayes_pls_golite062009
  • acetyl-CoA carboxylase activity
    		•  0.78189952793438 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  0.599203164789408 bayes_pls_golite062009
  • CoA-ligase activity
    		•  0.51228075142462 bayes_pls_golite062009
  • acid-thiol ligase activity
    		•  0.448084116680826 bayes_pls_golite062009
  • binding
    		•  0.374385700553659 bayes_pls_golite062009
  • succinate-CoA ligase (ADP-forming) activity
    		•  0.324506681366243 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.239594107637156 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle