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Protein Overview: shk-1

General Information:
Name(s) found: shk-1 / CE40295 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00014261 locus:shk-1 Potassium voltage-gated channel protein shk-1 status:Confirmed UniProt:Q8I4B0 protein_id:CAK55179.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 435 amino acids

    Gene Ontology:
    Cellular Component: voltage-gated potassium channel complex [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: potassium ion transport [IEALink to PubMed article]
    ion transport [IEALink to PubMed article]
    Molecular Function: voltage-gated potassium channel activity [IEALink to PubMed article]
    ion channel activity [IEALink to PubMed article]
    protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGNSEEGK GMLLRNGDDR IRLPSPQRGT PDTSSTQGHP YTDQIVTINV SGMRFQTFES  60
   61 TLSRYPNSLL GDRNKRQHFF VSDTNEFFFD RHRTTFESIL YIYQSGGRVK RPEIVPIDIF 120
  121 LKEMRFFQMG DDLLEEFWIA EGYEKPKEVM MPNNKTQRKI WELMEYPDSS LSARIIAFIS 180
  181 IAVIALSIIS FCWETVPSDI EEKPINNSAT AELLDEMDEK HYSPFFWIEL MCILWFTIEL 240
  241 ILRFISCPCK VTFATSVLNI IDFVAIAPFF VNFFFADTSK SNSSMSFAVL RVLRLVRVFR 300
  301 VFKLSRHSVG LQILGKTFRS SVQEFCLLIF FMAIALVLFA SGMYFAEQGE PNSKFTSIPA 360
  361 SFWFVLVTMT TVGYGDLVPL SPFGKVVGGM CAMIGVLTLA LPVPIIVANF KHFYRQENRL 420
  421 ASMKSKGDDA DDDIA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..435] PSI-BLAST 81.09691 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle