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Protein Overview: SLK1_ARATH

General Information:
Name(s) found: SLK1_ARATH [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
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  • Probable transcriptional regulator SLK1 OS=Arabidopsis thaliana GN=SLK1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 748 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development [IMP]
    gynoecium development [IMP]
    ovule development [IMP]
    Molecular Function: transcription regulator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRTVVSGAV ESSFSLTDAV GTEALNMQRS SGINNNMRIP TSPMSFSSNS VNIPGSLVLD  60
   61 GSAASMQHLP QQQQQQLLQQ QTGQGSVPMR ENNYSHVDKK PRLEVKQEDM LQQQILQQLI 120
  121 QRQDPTGRNP QMQALLQQQR LRQHQQMLQS MSPSQRLQLQ QQQQLRQQLQ QQGTQQIPPN 180
  181 VRPYEVGVCA RKLMMYLYHL QQRPAENCIT YWRKFVAEYF SPRAKQRLCL SQYESAGHHA 240
  241 LGMFPQAAPD MWQCDLCGTK SGKGFEATFD VLARLIEIKF ASGIIDELLY LDHPRENRFP 300
  301 NGLMMLEYRK AVQETVHEQF RVVREGHLRI IFSQDLKILS WEFCARRHEE LLLRRLIAPQ 360
  361 VNQLLQVAQK CQSTISESGS EGVSQQDLQS NSNMVLGAGR QLAKFMELQS LNDLGYPKRY 420
  421 IRTLQISEVV KSMKDLMNFT GEQKIGPIEG LKRLLEQTVT VKLQKQKMQE MEQFGNNGAI 480
  481 NGPVQAQMVL TSGTMNGSTG NNTNNHHQIV GRGAMSGPAE GQMVISSGTV SGATANNNSN 540
  541 NHNQIVGRGA MNGSAQAAAA LTNYQSMLMR QNAMNNPNSN TGKQEGFSSQ NPTPNSNQSP 600
  601 SSSSQQRHNL VTGGFPNSPQ MQQQQRTMNG PTNILPQNHP HQLQSPHSHG NTPEQQMLHQ 660
  661 LLQEMSENGG SVQQQQAFSG QSGSNSNAER NTTASTSNIS GGGRAPSRNN SFKAASNNNL 720
  721 HFSEDISITD HDFSEDGFFN NNDIYGGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..748] PSI-BLAST 7.69897 No description for 1y0fA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.67

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle