YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: EIF3CL, EIF3C

General Information:
Name(s) found: EIF3C [HGNC (HUGO)]
EIF3CL [HGNC (HUGO)]
Description(s) found:
Found 51 descriptions.
SHOW ALL
  • eukaryotic translation initiation factor 3, subunit C [HGNC (HUGO)]
  • eukaryotic translation initiation factor 3, subunit C-like [HGNC (HUGO)]
    • Organism: Homo sapiens
    Length: 913 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRFFTTGSD SESESSLSGE ELVTKPVGGN YGKQPLLLSE DEEDTKRVVR SAKDKRFEEL  60
   61 TNLIRTIRNA MKIRDVTKCL EEFELLGKAY GKAKSIVDKE GVPRFYIRIL ADLEDYLNEL 120
  121 WEDKEGKKKM NKNNAKALST LRQKIRKYNR DFESHITSYK QNPEQSADED AEKNEEDSEG 180
  181 SSDEDEDEDG VSAATFLKKK SEAPSGESRK FLKKMDDEDE DSEDSEDDED WDTGSTSSDS 240
  241 DSEEEEGKQT ALASRFLKKA PTTDEDKKAA EKKREDKAKK KHDRKSKRLD EEEEDNEGGE 300
  301 WERVRGGVPL VKEKPKMFAK GTEITHAVVI KKLNEILQAR GKKGTDRAAQ IELLQLLVQI 360
  361 AAENNLGEGV IVKIKFNIIA SLYDYNPNLA TYMKPEMWGK CLDCINELMD ILFANPNIFV 420
  421 GENILEESEN LHNADQPLRV RGCILTLVER MDEEFTKIMQ NTDPHSQEYV EHLKDEAQVC 480
  481 AIIERVQRYL EEKGTTEEVC RIYLLRILHT YYKFDYKAHQ RQLTPPEGSS KSEQDQAENE 540
  541 GEDSAVLMER LCKYIYAKDR TDRIRTCAIL CHIYHHALHS RWYQARDLML MSHLQDNIQH 600
  601 ADPPVQILYN RTMVQLGICA FRQGLTKDAH NALLDIQSSG RAKELLGQGL LLRSLQERNQ 660
  661 EQEKVERRRQ VPFHLHINLE LLECVYLVSA MLLEIPYMAA HESDARRRMI SKQFHHQLRV 720
  721 GERQPLLGPP ESMREHVVAA SKAMKMGDWK TCHSFIINEK MNGKVWDLFP EADKVRTMLV 780
  781 RKIQEESLRT YLFTYSSVYD SISMETLSDM FELDLPTVHS IISKMIINEE LMASLDQPTQ 840
  841 TVVMHRTEPT AQQNLALQLA EKLGSLVENN ERVFDHKQGT YGGYFRDQKD GYRKNEGYMR 900
  901 RGGYRQQQSQ TAY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run gi|14317902, gi|... No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..100] PSI-BLAST 4.221849 No description for 2i1jA was found.
    2 View Details [101..463] PSI-BLAST 19.69897 Heavy meromyosin subfragment
    3 View Details [464..558] deduced N/A No confident structure predictions are available.
    4 View Details [559..721] MSA 1.047952 View MSA. No confident structure predictions are available.
    5 View Details [722..913] FFAS03 2.14 Solution structure of the PCI domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5
    Term Confidence Notes
  • transcription regulator activity
    		•  2.85334044543318 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.8293727459515 bayes_pls_golite062009
  • DNA binding
    		•  2.66906990480864 bayes_pls_golite062009
  • binding
    		•  2.5888309899403 bayes_pls_golite062009
  • transcription factor activity
    		•  1.97506348695089 bayes_pls_golite062009
  • protein binding
    		•  0.933833716716586 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.764002516817766 bayes_pls_golite062009
  • structural molecule activity
    		•  0.756450227832198 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.665091289283954 bayes_pls_golite062009
  • transcription activator activity
    		•  0.542530812773621 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.423955395883599 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle