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Protein Overview: YOR238W

General Information:
Name(s) found: YOR238W [SGD]
Description(s) found:
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  • gi|37362697|ref|NP_014881.2| Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; Yor238wp [Saccharomyces cerevisiae] [NCBI NR]
  • gi|110282931|sp|Q08634.2|YO238_YEAST RecName: Full=Uncharacterized protein YOR238W [NCBI NR]
  • Uncharacterized protein YOR238W OS=Saccharomyces cerevisiae GN=YOR238W PE=1 SV=2 [Swiss-Prot]
  • Protein of unknown function [mips]
  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm [SGD]
  • Chr XV from 783677-784588 [hmr_yeast5_DM3-1_pombe.fasta]
  • YOR238W SGDID:S0005764, Chr XV from 783677-784588, Uncharacterized ORF [yeastflysequest.fasta]
  • Yor238wp [Saccharomyces cerevisiae] [nrdb_11152004_Chlamydomonas]
  • YOR238W SGDID:S000005764, Chr XV from 783677-784588, Uncharacterized ORF, "Hypothetical protein" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • YOR238W SGDID:S000005764, Chr XV from 783678-784589, Uncharacterized ORF, "Hypothetical protein" [yeast-contam.fasta]
  • YOR238W SGDID:S000005764, Chr XV from 783678-784589, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm" [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta]
  • Uncharacterized protein YOR238W [nr-271106-contam.fasta]
  • hypothetical protein; Yor238wp [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • Uncharacterized protein YOR238W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR238W PE=1 SV=2 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • YOR238W SGDID:S000005764, Chr XV from 783677-784588, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm" [yeast-030211-contam.fasta]
  • YOR238W SGDID:S000005764, Chr XV from 783677-784588, Genome Release 64-2-1, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm" [20141208_orf_trans.fasta]
  • TR7049|c0_g1_i1|g.4889 ORF TR7049|c0_g1_i1|g.4889 TR7049|c0_g1_i1|m.4889 type:complete len:304 (+) TR7049|c0_g1_i1:205-1116(+) [Y12_S_cerevisiae-Sep2015-contam.fasta]
  • ID=asmbl_2507|g.1704 ORF ID=asmbl_2507|g.1704 ID=asmbl_2507|m.1704 type:complete len:304 (+) ID=asmbl_2507:221-1132(+) [Y12_quiver_Trinity_v2_2_0_PASA_2June2016-contam.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 303 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEKVELILV PCHSIWKSSS HPSDNSVNLG QLPEYWHLAP FQYEGNDHLA FIKHGLTAIK  60
   61 LLLQRFDTAT VIFSGSQTKK EAGAISEAQS YYFLFEKLIR YVMSNDNIDV PNFDNELRLL 120
  121 LKEVKNLLSS QNVNVDELFY GGSITTEEFS LDSFDNLIYS IYRFEEVNKK FPQKITIIGF 180
  181 AFKMPRFISC HAKAIDYPQS NITYIGIDPK PANYNQTQLS KYYDDLVQME DKNALSLFSS 240
  241 DWYATKDRLL TKKRSRNPFN RTAPYAQNIF CKENGKRIEG IEDDEEYFET KIKCKMPWSS 300
  301 PRQ

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) LIN1 YOR238W

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YOR238W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..141] deduced N/A No confident structure predictions are available.
    2 View Details [142..303] MSA 1.017983 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle