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View Structure Prediction Details

Protein: YOR238W
Organism: Saccharomyces cerevisiae
Length: 303 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YOR238W.

Description E-value Query
Range
Subject
Range
YOR238W - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...
488.0 [0..1] [303..4]

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Predicted Domain #1
Region A:
Residues: [1-141]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEKVELILV PCHSIWKSSS HPSDNSVNLG QLPEYWHLAP FQYEGNDHLA FIKHGLTAIK  60
   61 LLLQRFDTAT VIFSGSQTKK EAGAISEAQS YYFLFEKLIR YVMSNDNIDV PNFDNELRLL 120
  121 LKEVKNLLSS QNVNVDELFY G

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [142-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSITTEEFSL DSFDNLIYSI YRFEEVNKKF PQKITIIGFA FKMPRFISCH AKAIDYPQSN  60
   61 ITYIGIDPKP ANYNQTQLSK YYDDLVQMED KNALSLFSSD WYATKDRLLT KKRSRNPFNR 120
  121 TAPYAQNIFC KENGKRIEGI EDDEEYFETK IKCKMPWSSP RQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle