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Protein Overview: YJL016W

General Information:
Name(s) found: YJL016W [SGD]
Description(s) found:
Found 21 descriptions.
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  • Putative protein of unknown function; GFP-fusion protein localizes to the cytoplasm; conserved in closely related Saccharomyces species [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 561 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGILDSLKKP VNIKSSLPKF SRSATSINLS SHPVSSRSFL ELPPELFSIT KPIFKLLQAH  60
   61 ANKIYFQSSD AEAVWNVKDS SGHVFEAESI SLLGSHIIIT NSSVQVADVA IIDSPSNINQ 120
  121 CEISSVGEFL QFNNGQLSIT CNDFGLLEKF KRLCMISIFE FISIYKALTG TVISSYGLRM 180
  181 SDMHIILNSP FNFKDWCEVY LDGQGWVKVW CHIDKVSKTN NSKSSSDNDA KGKYQIRFYR 240
  241 DDKSTSSKNC VFFIPDNEYV QDIFFYNINA AEPSKNMNDF FQGLQMIKLV GNVRFCSDTD 300
  301 FNDVVDSGSI YSSANNGSGD SSSTALNNES PNTTPKSRTF FSPKGHRRNS SHVSSLTSRS 360
  361 TKKPITNFTT RTNGLLIRPL PHHGVHHLEA MIRFIIPLMD CARLYGRPVQ FKTERTDINS 420
  421 LMFGLPKLPS VDYFAEEEIA HLMTQEFNPL KEKDTDDTMA LTMSRFSSYL QERMTKVSKR 480
  481 NTELNFRTFS DVMGMYNTTR DHSKLNCMSD KDNSVKEFSL SDKSNVSSET TNMMNQLQVN 540
  541 AHEYKSSMCE RPIVASTSPI A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YJL016W Huh WK, et al. (2003)
    View Data YJL016W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..132] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [133..295] deduced N/A No confident structure predictions are available.
    3 View Details [296..380] MSA 1.023978 View MSA. No confident structure predictions are available.
    4 View Details [381..561] MSA 1.017914 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle