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Protein Overview: YPR117W

General Information:
Name(s) found: YPR117W [SGD]
Description(s) found:
Found 23 descriptions.
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  • Putative protein of unknown function [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 2489 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMLPWSQIR DVSKLLLGFM LFIISIQKIA SILMSWILML RHSTIRKISF GYFFGTSIRR  60
   61 AFILTDFAQI YIGKITLRIG WKPGIVFHNV DLKLFGKDSH ITAHSTKDSR TYFNPRDQTF 120
  121 TFVINRRVLS ILKLVFSFST FFHTLALTVP NGKQYKLNIG SITISHPHDD TIKLEAFLHD 180
  181 FTHPETKDTL NHTGFFMVCK IGKEDDTGSN CTKVILKNWK SSLKISDVCW HLPEKKGKNL 240
  241 HSEPVEPFSA GDDAEMLTSY RKMLKPFHYP LKTLNILDLK VENVKLIYKK KFTIRISSAQ 300
  301 LYLESISILN NVSALELLPL NKPTWGDFEL SLSANAVVVD IDGNTAVRIP FGNVILTSDI 360
  361 LLFLLDNVPL RRTKVSSILN IINPSVFLTI HQVLEVLHLV DKFDSPETSS CTNTNDRSLN 420
  421 ILDLDIDRLP SFNFELLMSN FISRLHISDE ENVTFKVFST HALFSRNNLS MTPKKGQVMQ 480
  481 IRPDWPFAKT ALVSDQLSNY IKIVGTSLSY LRIPTEQDAN PVSIPVCGFE RLDTFLDEFS 540
  541 NSKLIVQSTL RHSYVSLENI EVLHTLSRAF DKIYLLISSR TKRNAAHKAN GGKLGDLNEA 600
  601 KKTFNWSLKL RMKDISCSLL VAGFLPKNLD PVEAENFNLS DVTRGAKVVF TESILLADSQ 660
  661 EKNFTIIDAS VYRFMDGTTY KPSPEVIIQF TNLLLSFNDS DEIHFSLPKI KFKMDVNIIW 720
  721 LWFYIRSIWI KFRPNSKLSR NSVSSVKSVN VLDRLRVDIG KMIIELTLPH NTEVLLIFER 780
  781 IGLSSSTKNL TIASLSAYVV SVYVKHIKVY VSLLNINDFE LDTEELICKK SAVINTSLIH 840
  841 FHAEYHFRFY MITDNIVTLY KSFKQIKLAF SNLNEFKRLY PQQQFPKKVP NLHICCQDFL 900
  901 IDIEEDPFEQ ELGLILKVGV LEQRERLKKL EEFKEKLSTY EDMNVRLRSL YDTSRGQSFF 960
  961 PEFYANDQEY EQKAYLRLLE NFSTSWIARY RKAKLSFYGM PYRVISREEL GTKYHLFTRQ1020
 1021 KTSTVANLVV KDLDFKLGSP SFPLDNYMDF VYQYGKKVPK STEYTLLIIL GLKIKSALWE1080
 1081 LRLRDYPIPA ISFPDTFTTG DVVFAEKMPA PCALHTVYVP FVSSAQRSPY NDANTIYGLH1140
 1141 IIRTINSVKT YFNIRSMVTS SSSARITWGK SLQPGYESLM LWFDFLTKPL IDPSKKLGFW1200
 1201 DKFRYLVHGK WIYEFSEESE IHLNIKGSHD PYKITDDGAG LAFCWSGGTT IYVHNSTDPK1260
 1261 EFLKIESQRF QLAVPDFAKV SKFDKVFMKL DGRVIWTLGL LFEQGDISKA GDEERFLPNR1320
 1321 PHYEIQLMNP DGVADLDHHD TYKGFRTSFI HMSFGVYSSE HGSINSLYLA PYALTHFFKW1380
 1381 WNLFHTYTSG PIRQGRLFTD VLQNKTKFGR SLFTIAYQLH LKRLMVTHIY RHITTQYDLE1440
 1441 KDRKITFTGL KGRFDSLKID LHQKRVKLTH TNQKLNKSKP VWKFKMSRGE IDCAEADIRI1500
 1501 LSTLFDQEAV KEILTSGLDG ILEDEPSRPI TPQDVEYLRE SDWYDYEDYI DLNQVPLGSS1560
 1561 LPLKLEAIPL LYSPRISYFR KINDDGYVLA YPFGTEESHN CLIGKNHPEL TQEKLATERK1620
 1621 REIEEQLKLL HITLSELQSN KGGGSVSGNS ERYARELKAE VAELNHRLHT VNTILSDLKI1680
 1681 SETIPGGNTD GDSSSSLSDT DVNLENAPPI QNRISLLRTN TVESFVSMRK ASTMQVESTY1740
 1741 DNRFMVHNIE LKIDNKIRHH LLEYASSAFE RKSMRFAVTY KSVTILKELL GNVLTGVRTS1800
 1801 VEDYGSILED DLASNSEFIE HFEKLIREVP SDDFDYVDNY LFRLISPQVQ IKSDVERNAA1860
 1861 VILAARDIEM GIIDIVQVYG KSGKRIPVDV DTIVETRYSA VSKDIQLFTL FKKDLEGPEG1920
 1921 RFFHKNGYGS DKESDIWPPW IPLEMCFDGS LLDKHVFLKR RSMFLTYVAP NPLFFSANDT1980
 1981 SAFSYDSRFR IAFPGLVLTS DCQQYCAVYA IAEDLLSFGS SLDEKVEKLS RILFTDEVRN2040
 2041 NLENLDVSVV TALQERIKEL YYTRAYLKLH EPRLFMKSGQ ELTFDIQTST LKLTLLMTAI2100
 2101 KKTYDRMGSG NRVIQKRLRW QVGTDELIWE LYDESKTPFV TIGLGPSTFI RSETSDGTNS2160
 2161 NKVSISSLQC FNQQENPVYT ELLAPFYENS SYNKNAPMVE IFWILGPSVG GISDLQDLIV2220
 2221 SLQPLIFKMD HKTSEKLMNY LFPKIEQTSI EPNSPELVPR SSTSSFFSSS PVLRHSLSNG2280
 2281 SLSVYDAKDV DSWDLRSIQS KEGIKKHKGD HRKLSASLFV QPDYNINEMV KRSGTFFNVK2340
 2341 SIIIRKTLMS VCYKGSHSLL TDVNNLIVRV PVLKYHNKLW SREEFFTALK RDVVRIVLQH2400
 2401 LGNIIGNKFL PHKKENKKKT SMEIHRLLSP DSQNRDNSHI LEVEGHNSFY SSTHSSDIRS2460
 2461 INSDETYNEN DGNGVKPFYP VTSEFSKNK

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) MPD2 YPR117W

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run TID3 No Comments Cheeseman IM, et al. (2002)
    View Run RPA135 No Comments Schneider, DA, et al. (2006)
    View Run MLP2 #34 Asynchronous SPB prep Keck JM, et al. (2011)
    View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)
    View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen PSF3 YPR117W 1 Hazbun TR, et al. (2003)

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..739] deduced N/A No confident structure predictions are available.
    2 View Details [740..1475] MSA 3.012843 View MSA. No confident structure predictions are available.
    3 View Details [1476..1700] deduced N/A No confident structure predictions are available.
    4 View Details [1701..1935] MSA 1.005944 View MSA. No confident structure predictions are available.
    5 View Details [1936..2437] MSA 3.009888 View MSA. No confident structure predictions are available.
    6 View Details [2438..2489] deduced N/A No confident structure predictions are available.
    7 View Details [986..1062] deduced N/A No confident structure predictions are available.
    8 View Details [1063..1831] FFAS03 1.02 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain
    9 View Details [1832..2109] FFAS03 1.32 No description for 2oevA was found.
    10 View Details [2110..2252] FFAS03 1.32 Structure of Unphosphorylated STAT1
    11 View Details [2253..2318] deduced N/A No confident structure predictions are available.
    12 View Details [2319..2489] MSA 1.031991 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.
    8
    Term Confidence Notes
  • binding
    		•  0.301700930786307 bayes_pls_golite062009
  • catalytic activity
    		•  0.176212702885001 bayes_pls_golite062009
    9 No functions predicted.
    10 No functions predicted.
    11 No functions predicted.
    12 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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