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Protein Overview: PHM7

General Information:
Name(s) found: PHM7 / YOL084W [SGD]
Description(s) found:
Found 24 descriptions.
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  • Protein of unknown function, expression is regulated by phosphate levels; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery and vacuole [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 991 amino acids

    Gene Ontology:
    Cellular Component: fungal-type vacuole [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADSSSTSAF ISTLIIYGLT AVVFVWLFLL LRPKNRRVYE PRSLKDIQTI PEEERTEPVP  60
   61 EGYFGWVEYL LSKPHSFLIQ HTSVDGYFLL RYIGIVGSLS FVGCLLLLPI LLPVNATNGN 120
  121 NLQGFELLSF SNVTNKNRFY AHVFLSWIFF GLFTYVIYKE LYYYVVFRHA MQTTPLYDGL 180
  181 LSSRTVIVTE LHKSIAQEGE MQMRFPKASN VAFAYDLSDL QELCKERAKN AAKYEAALNK 240
  241 VLNKCVKMTR NKTQKQLDKL YNNGTKPKDD LETYVPHKKR PKHRLGKLPL CLGGKKVNTL 300
  301 SYSSKRIGEL NEEIHEKQAD WASNDRQPAC FIQFETQLEA QRCYQSVEAI LGKKNFGKRL 360
  361 IGYSPEDVNW GSMRLSSKER HSRRAVANTI MVLLIIFWAF PVAVVGIISN VNFLTDKVPF 420
  421 LRFINNMPTF LMGVITGLLP TIALVVLMSL VPPFIVMLGK LSGCVTRQET DLYSQAWYYA 480
  481 FAVIQIFLVV TATSSASSTV DSIIDRPRSA MTLLANNLPK ASNFYIMYFI LKGLTGPTWT 540
  541 ILQAVNLLLS KVLGRVLDST PRQKWNRYNT LATPRMGIVY PGIEILVCIY ICYSIIAPIL 600
  601 LFFSTVMLTL LYVAYLYNLN YVFGFSFDLK GRNYPRALFQ IFVGIYLSEV CLLGLFIMAK 660
  661 TWGPLVLEVF WIVVTALAHI YMKRKFIPLF DAVPLSAIRH ARGEPGYSYP TSDLGLQEIK 720
  721 DIADEMKGKY EQDNTHGILT PVTKDDLKKA NLIPDNDGSS ENGTPSNPFE SGSERASLSG 780
  781 SNAESDSIKK LNDTVIKKSS TLSSSTKDNN ESTFVPEGEK FRKFHYSDVE ALRNKRPYDE 840
  841 DDHSKHGPEG AVPVNADAGV IYSDPAAVMK EPQAFPPDVL ETNTWTRRIL QFFNPRRSYP 900
  901 FDSVRMRFPL VFNTSIEYDE EYLSSAYTDP CVREKDPIVW CCKDPLGVSK QQIQEARSNG 960
  961 LDVRDDFTRY DEKGKVIFTY NPPDYEPEAK K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #26 Asynchronous Prep4-TiO2 Phosphopeptide enriched, Steps1-2 Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen HMT1 PHM7 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data PHM7 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..193] MSA 1.033985 View MSA. No confident structure predictions are available.
    2 View Details [194..292] deduced N/A No confident structure predictions are available.
    3 View Details [293..780] Pfam 228.207608 Domain of unknown function DUF221 No confident structure predictions are available.
    4 View Details [781..991] deduced N/A No confident structure predictions are available.
    5 View Details [714..775] deduced N/A No confident structure predictions are available.
    6 View Details [776..832] deduced N/A No confident structure predictions are available.
    7 View Details [833..991] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • nucleic acid binding
    		•  3.16043509094686 bayes_pls_golite062009
  • binding
    		•  2.45816542782438 bayes_pls_golite062009
  • RNA binding
    		•  2.12977287614929 bayes_pls_golite062009
  • protein binding
    		•  1.45646458884073 bayes_pls_golite062009
  • transporter activity
    		•  1.17508255371693 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.076425286008 bayes_pls_golite062009
  • mRNA binding
    		•  1.01590992981116 bayes_pls_golite062009
  • ligase activity
    		•  0.839455841912248 bayes_pls_golite062009
  • hydrolase activity
    		•  0.651922400349676 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.550646307051285 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.502017879414539 bayes_pls_golite062009
  • DNA binding
    		•  0.393909838101373 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.30461161014793 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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