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Protein Overview: YMR085W

General Information:
Name(s) found: YMR085W [SGD]
Description(s) found:
Found 15 descriptions.
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  • Putative protein of unknown function; YMR085W and adjacent ORF YMR084W are merged in related strains [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 432 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFYLSSDCA SLARYVSKVV YLEDNDIAHI YDGELHIHCS KIGSEDFSFR TVQKLELELS  60
   61 KIKKGPYDNF MQKEIYEQCE TTKNVMRGRV DAFTNRVVLG GLENWLTELR RAKRIIMIAS 120
  121 KASFHSCLAA RPIFEELMEV PVNVELALDF VDRNCCIFRN DVCIFVSRSG ETTDTINALN 180
  181 YCIKKEAVTI GVVNCSGSSI SRFTHCGVHT NTGPEKGIAT TKSYTSQYIA LVMIALWMSE 240
  241 DLVSKIERRK EIIQALTIVP SQIKEVLELE PLIIELCDKK LKQHDTFLLL GRGYQFASAL 300
  301 EGASKMKEIS YVHSESILTN ELGHRVLAVA SDNPPIIAFA TKDAFSPKIA SCIDQIIERK 360
  361 GNPIIICNKG HKIWEQDKQK GNVVTLEVPQ TVDCLQGILN VIPLQLISYW LAIKKDIGVD 420
  421 LPRDSAMSAP DI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..263]
    [419..432]    		 PSI-BLAST 630.9897 "Isomerase domain" of glucosamine 6-phosphate synthase (GLMS); Glucosamine 6-phosphate synthase, N-terminal domain
    2 View Details [264..418] PSI-BLAST 630.9897 "Isomerase domain" of glucosamine 6-phosphate synthase (GLMS); Glucosamine 6-phosphate synthase, N-terminal domain


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle