YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ARG80

General Information:
Name(s) found: ARG80 / YMR042W [SGD]
Description(s) found:
Found 27 descriptions.
SHOW ALL
  • Transcription factor involved in regulation of arginine-responsive genes; acts with Arg81p and Arg82p [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 177 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Biological Process: arginine metabolic process [TASLink to PubMed article]
    positive regulation of transcription from RNA polymerase II promoter [IDALink to PubMed article]
    Molecular Function: DNA binding [TASLink to PubMed article]
    specific RNA polymerase II transcription factor activity [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSNSDGSST SPVEKPITGD VETNEPTKPI RRLSTPSPEQ DQEGDFDEED DDDKFSVSTS  60
   61 TPTPTITKTK DSSDTSTVTR RKQPIRYIEN KTRRHVTFSK RRHGIMKKAY ELSVLTGANI 120
  121 LLLILANSGL VYTFTTPKLE PVVREDEGKS LIRACINASD TPDATDTSPA QEQSPAN

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details (MIPS) Mewes HW, et al. (2004) ARG80 ARG81 ARG82 MCM1
    View Details Qiu et al. (2008) ARG80 ARG81

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data ARG80 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..177] PSI-BLAST 295.758605 MCM1 transcriptional regulator

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  4.47820295830817 bayes_pls_golite062009
  • DNA binding
    		•  4.34885522982729 bayes_pls_golite062009
  • nucleic acid binding
    		•  4.22473647889076 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  3.75742221961238 bayes_pls_golite062009
  • binding
    		•  3.73009730829487 bayes_pls_golite062009
  • transcription factor activity
    		•  3.68208249443337 bayes_pls_golite062009
  • transcription activator activity
    		•  2.70980744336671 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  2.63280961628615 bayes_pls_golite062009
  • protein binding
    		•  2.32692027935469 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
    		•  0.37351258349543 bayes_pls_golite062009
  • DNA bending activity
    		•  0.167327205417291 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle