YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ARG80
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSNSDGSST SPVEKPITGD VETNEPTKPI RRLSTPSPEQ DQEGDFDEED DDDKFSVSTS  60
   61 TPTPTITKTK DSSDTSTVTR RKQPIRYIEN KTRRHVTFSK RRHGIMKKAY ELSVLTGANI 120
  121 LLLILANSGL VYTFTTPKLE PVVREDEGKS LIRACINASD TPDATDTSPA QEQSPAN

Type	Start	End	Confidence
Cytoplasmic	1	109	0.84
Transmembrane Helix	110	131	0.78
Non-Cytoplasmic	132	177	0.96