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Protein Overview: YLR046C

General Information:
Name(s) found: YLR046C [SGD]
Description(s) found:
Found 28 descriptions.
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  • Putative membrane protein; member of the fungal lipid-translocating exporter (LTE) family of proteins; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 270 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [ISSLink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATHTSKRRI HRWENNELSE ENSTIIYFPA RGLMWTHFPF VLGICLEFVG YVLKIVFINS  60
   61 PSISTFIAQS VLLLIAPSLY ALSIFMLFSK MARLILMEAY MLIPAKFSTV SFVVADMIGR 120
  121 VLQAVGGGLL SSWNSRNTGR ILIIVGLFIQ IFCYTFLTFS QLFLHYKMKA TPSKIVRDSN 180
  181 EWFQYNFILL AGILLVNGRT IVRVVQFLMG LQSYIGQHEW CLYVFDTVLM FLLPLIFLAT 240
  241 FRARNLFKLQ DKSVNIQLNK LLDKESVSED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 No Comments Schneider, DA, et al. (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen RGD2 YLR046C 1 Unpublished Fields Lab Data
    View Screen NUP2 YLR046C 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..270] MSA 3.011953 View MSA. No confident structure predictions are available.
    2 View Details [112..270] MSA 6.140995 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle