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Protein Overview: YLL007C

General Information:
Name(s) found: YLL007C [SGD]
Description(s) found:
Found 25 descriptions.
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  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLL007C is not an essential gene [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 665 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHNRQMPDE SLENIKVLLN PKLGKPVKSL TSAQSKACYH TLISNKNLNK TSDEYEKLLA  60
   61 NYILLCDEKY LCKTVIPDSR FWAILCDNCQ KLRSETLVAN LIRIFNVALK CQDSNKNEVI 120
  121 VSICHISREN SQLIGILLQL LSQRPIHIPL FTDTILCITL FLKCSLTLCE TSLSHAVEFV 180
  181 PRILILLFQY NFPASMSELL YIEDLQPLIL EEFVPLKQRL INFLSSVSID DYSCSLKADL 240
  241 LTAIKDNSVF QKGLEMEMGD LPSINLLNAY DTFTFLNSPN GSFKRLYTEQ LLFGENDFPL 300
  301 YEAIFKLSDQ FRRLFNLSGK KENQYSDSER DLKLQIATAV LNRQTCFYKT LELFLRFWIE 360
  361 SLAKSQSDLV SLLNLAIITL KYVCLSSSDL EAAIQTKSLL KTQVVALDSM RYKFARTLQL 420
  421 DSIKKEQYRT WSSSIASFDT MLSGQVRDYV RHQRLLQLQK GTWVYAENPL NPEAGTPKVY 480
  481 FLIVSDNHAN LLAREFETQT NDLPYLFDNK ILTSPGSEAL ANGRTKVVVL KHITSFKSIE 540
  541 LTTPSRRTSS NVYIKLDEAN VYTGVELKDR NDRTVLKFYL DTEEGRYIWL DGLKLISPFQ 600
  601 HEDISEDTKE QIDTLFDLRK NVQMINLNVR QDIIVPPPEP SDEDEDEEFY NLETLKKVTQ 660
  661 NFYFD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen NAF1 YLL007C 2 Hazbun TR, et al. (2003)
    View Screen SPO21 YLL007C 2 Unpublished Fields Lab Data
    View Screen VPS5 YLL007C 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YLL007C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] deduced N/A No confident structure predictions are available.
    2 View Details [116..302]
    [355..471]    		 ORFEUS 7.59 Hemolysin E (HlyE, ClyA, SheA)
    3 View Details [303..354] ORFEUS 7.59 Hemolysin E (HlyE, ClyA, SheA)
    4 View Details [472..665] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  1.14406613230923 bayes_pls_golite062009
  • protein binding
    		•  0.749738289794699 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle