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Protein Overview: YKR041W

General Information:
Name(s) found: YKR041W [SGD]
Description(s) found:
Found 20 descriptions.
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  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 250 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDDDYMNSD DDNDAEKRYV RPIFVRKRRR EEDYVATSKD NIHHHPCDWS AKPSQRQNEN  60
   61 EQKSTIRLVP VAMNTPKCQE KKKKRKGVGT TSHEATLFEY GESIAGYKCV TTESERDRLK 120
  121 RSHESESSSE SEVDVFAFDQ AKGISSKVEA EERYARAVRQ YWRMTKDEPA TLPLPGTPTL 180
  181 AAVSLDMIDD KSVEQFYTMS SALMDANRLD LIRRDRIRWH PDKHRYHKSK VTKLFQAING 240
  241 LWEQEKTEKR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YKR041W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..167] MSA 1.002947 View MSA. No confident structure predictions are available.
    2 View Details [168..250] deduced N/A Confident ab initio structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle