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Protein Overview: MRPL13

General Information:
Name(s) found: MRPL13 / YKR006C [SGD]
Description(s) found:
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  • gi|486413|emb|CAA82076.1| MRPL13 [Saccharomyces cerevisiae] [NCBI NR]
  • pir||S25816 ribosomal protein YmL13 precursor, mitochondrial - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|401641|sp|Q02204|RM13_YEAST 60S ribosomal protein L13, mitochondrial precursor (YmL13) [NCBI NR]
  • gi|3523|emb|CAA46246.1| ORF YK105 [Saccharomyces cerevisiae] [NCBI NR]
  • (Q02204) 60S ribosomal protein L13, mitochondrial precursor (YmL13) [Swiss-Prot]
  • MRPL13 - ribosomal protein YmL13, mitochondrial [mips]
  • Mitochondrial ribosomal protein of the large subunit, not essential for mitochondrial translation [SGD]
  • MRPL13, Chr XI from 450061-450888, reverse complement [yeast_orfs2]
  • Chr XI from 450061-450888, reverse complement [yeastorf3.fasta]
  • MRPL13 [Saccharomyces cerevisiae]gi|3523|emb|CAA46246.1| ORF YK105 [Saccharomyces cerevisiae]gi|401641|sp|Q02204|RM13_YEAST 60S ribosomal protein L13, mitochondrial precursor (YmL13)gi|419879|pir||S25816 ribosomal protein YmL13 precursor, mitochondrial [nrdb_11152004_Chlamydomonas]
  • MRPL13 [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • ORF YK105 [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 275 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    mitochondrial large ribosomal subunit [TASLink to PubMed article]
    Biological Process: translation [TASLink to PubMed article]
    Molecular Function: structural constituent of ribosome [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRRKGGHSM RMSSLLKLHC IRPLPQRSVW LSGYKQKARC IHSSAANGDF MSWFKRKKQE  60
   61 EHQEPVKDTK QLIKDIEEGT NEASSQSSSN NKNRLELIPE NFIGEGSRRC KRQKELKLAV 120
  121 SSAPFNQWLS RDKITSDNQL DDMILQATEK TLGKVDQDVQ FSDLVAKFQF TKFLQSKSGY 180
  181 LIPDYELTTL STPLQFKRYI KEKILPSAND PKLAYKEAEP NAIHPFSDNY ASPNIYVVND 240
  241 VTSKEQKSKY DTIMKEIQKL EDDATRKALE TARSA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run CWC2 No Comments Hazbun TR, et al. (2003)
    View Run ALG13 No Comments Hazbun TR, et al. (2003)
    View Run NOP9 No Comments Hazbun TR, et al. (2003)
    View Run NAF1 No Comments Hazbun TR, et al. (2003)
    View Run NSE3 No Comments Hazbun TR, et al. (2003)
    View Run SEC10 No Comments De Craene, J., et al. (2006)
    View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
    View Run BOI1 Sample bob1 (2nd set) from october 2005 McCusker D, et al (2007)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..275] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle