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Protein Overview: LOT5

General Information:
Name(s) found: LOT5 / YKL183W [SGD]
Description(s) found:
Found 24 descriptions.
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  • Protein of unknown function; gene expression increases in cultures shifted to a lower temperature [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 306 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKKKPKCQI ARTKPSVENV IPYNQFKKTQ PRFNGNFSAL NNEEYIILFG GGRDLILGSL  60
   61 TPCSSSHLSN QANPQDTSEY GTDLFILNSC IIIWFNGLGY GLEIPYSSVL YHASRRLPDG 120
  121 REGLQLEILL TLERDEVLDM LYQSLAPQAC EFDGEEAHAF TVRSVELTIR PKYSIYDRHY 180
  181 NNEIETLFTF ENFGVNRGDD LVNNCNEALA VCMDLHGEDV QDQDQEQYQD PSMAFEGAQD 240
  241 LNATYSGLGD TLHGPPVYQN DGLADDLDGD LVMDNVVSRG GPEASMSMEF YANQNLAGRK 300
  301 NSRDNE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen RSR1 LOT5 1 Unpublished Fields Lab Data
    View Screen RRB1 LOT5 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data LOT5 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..306] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle