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Protein Overview: STB6

General Information:
Name(s) found: STB6 / YKL072W [SGD]
Description(s) found:
Found 26 descriptions.
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  • Protein that binds Sin3p in a two-hybrid assay [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 766 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLEATHQKE NHLSPLASFI FPDFRALFNI GFNLYSNINY KEVDINGFEI YIVEQWAAQR  60
   61 KISTLITSYT GNLQDTISAV EVALPEDPEE WPCCLKKYHE ELLKFSSPKK TAKGTLFVTN 120
  121 LSSFKSTLNL LHVECGNLKK IWKNFKTNYD LKRLHCGGRS AQLLKKTPSA SIAKFAQLYK 180
  181 FPNSAFSHEI TSDFQQPSLQ NDNSSISSIE NIPVNHCPVV ELTTLVQISL SYFALFEYKK 240
  241 ERDGLLCNGT KQSLEKWWEI YGKRYHGIDK PKNETILGPT TVASLLSLVL TCYFKLMVED 300
  301 CMSAKDPFDE EEFYSGLYAF QKKYGLSKNN KQTSLDELTI DKLFEVSSKT SNKDIFKFKK 360
  361 VVKSTVQDMT GKGNFMHLSN EILTTDLDTL VKNIHGGSLG KLWKGRSASR KETCMVWERK 420
  421 TFLSFKFERG DPSLQLENNE LFYGTSVPSE QLTTSNKEDS DTQPTKRNSI YDIANGSKSS 480
  481 LSISSMFCNY DETRYKSTNN LNRAYRGEYF RRNSIPFCND GIHDTKKISA DLNKIDGLYR 540
  541 CNSYSEVQNA IELWSLPFDS SVIRLARDLL KIQSLMSVQR QLDEIRDGYL GKNSQRSYQN 600
  601 DLMFRQSLNK LQEMCERCKR GSNEFHWEYG NMQNKQQILE SEKKDMKSLS SKLKYNVRIL 660
  661 DRRVRDVEAS VDHFDRKLED VRKKLLEQNN SKDISMALES PCDKFEFDSF MDSIVQSQQT 720
  721 KYEGLCFKIL DKKSLRKLKK EFWKWSTWTF DTFLYKNRPN KEKDTL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RLF2 identification data - first search in cascade Green EM, et al (2005)
    View Run MLP2 #34 Asynchronous SPB prep Keck JM, et al. (2011)
    View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)
    View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data STB6 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..469] deduced N/A No confident structure predictions are available.
    2 View Details [470..766] MSA 1.00389 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle