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Protein Overview: VPS55

General Information:
Name(s) found: VPS55 / YJR044C [SGD]
Description(s) found:
Found 36 descriptions.
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  • Late endosomal protein involved in late endosome to vacuole trafficking; functional homolog of human obesity receptor gene-related protein (OB-RGRP) [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 140 amino acids

    Gene Ontology:
    Cellular Component: late endosome [IDALink to PubMed article]
    Biological Process: late endosome to vacuole transport [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMEFKVSPLT KIISLSGFLA LGFLLVILSC ALFHNYYPLF DILIFLLAPI PNTIFNAGNK  60
   61 YHTSDFMSDS SNTGQDLAHF LTGMLVTSGI ALPVVFYHCQ LIGHLSCIMC MIGGLIIYSS 120
  121 IVIFKWFFKK DFNEDDSLFG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data VPS55 and SNF7 Huh WK, et al. (2003)
    View Data VPS55 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] Pfam 67.638272 No description for PF04133.5 was found. Confident ab initio structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle