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Protein Overview: YJR030C

General Information:
Name(s) found: YJR030C [SGD]
Description(s) found:
Found 27 descriptions.
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  • Putative protein of unknown function; expression repressed in carbon limited vs carbon replete chemostat cultures; YJR030C is a non-essential gene [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 745 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELFNKEEAS FETLLKRLLV VCESHSRYHG SSLDPMVKVG HEMRKISGYL RCILRKHAAN  60
   61 HDDMSLTQSI VNSYKSLFKD AQILDLYHNL LFGCMHLLLD ANMSYFRMDS QKLFAVLLFK 120
  121 VYYKLRDIFY VTNEVRLGSL ISAFVYKFKS CYDFISCNSL KYGSVRDVIS GEVSLINLPP 180
  181 IDSNKVINRA YYRLDVKKLA INNKLVEILE LDNGEIAIFE VLSEKMPYTL QTIDNLFQSL 240
  241 ALGNHDLMNV GRSLLFRPFR SGDLDLIRLD DSGAKLKVPI NNSIVLRLTC KDPIQWQEYW 300
  301 KHVIRKLFDS TATKEYKRSG SKISQQVYVR SNNPDYTSPK RNDDMPISSV KISDTIHNGR 360
  361 TLHRSIPLPG SLSSLIETSN EYPDEESLSI MSERATVSED SDLDTSLKDI ESLSCEKLIE 420
  421 LDKSIQVPLS PKYMDTPTLK NIRTASQTFS LESVSPELIE SVASEIDDSE SIISEDGKDK 480
  481 RDKDLFDPDI DFYKPTLYRR KSSSLLSIFS KNKKNLTIDI PKNHSRSLFS LPGNQQSVTP 540
  541 VSATPHDDNV DETYVSFPLS INTSGGAVYF ENDSVKVSLW NGKSWVPLSK DMLCLSLILS 600
  601 GDNETLLIVY KDFEKEKCKL VVKLEPTWKY NRSTAQDVQL RIPSSDFKAS VFGTLHDLTL 660
  661 SIRCAQAAKL VNVLQYQLQS SQTSSLSPST TTGTLSTVSS SSCFSRNVTR SSTENSELAN 720
  721 MKDSSEYISS SLLLSSVKVR QLRNM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 No Comments Schneider, DA, et al. (2006)
    View Run MLP2 #25 Asynchronous Prep3-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #26 Asynchronous Prep4-TiO2 Phosphopeptide enriched, Steps1-2 Keck JM, et al. (2011)
    View Run MLP2 #10 Mitotic Prep1-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..420] MSA 1.002833 View MSA. No confident structure predictions are available.
    2 View Details [421..745] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle