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Protein Overview: YHR219W

General Information:
Name(s) found: YHR219W [SGD]
Description(s) found:
Found 22 descriptions.
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  • Putative protein of unknown function with similarity to helicases; located in the telomere region on the right arm of chromosome VIII [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 624 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLNQRKEKK GQHVGCCGSR TDLSADTVEL IERMDRLAEN QATASMSIVA LPSSFQESNS  60
   61 SDRCRKYCSS DEDSDTCIHG SANASTNATT NSSTNATTTA SINVRTSATT TASINVRTSA 120
  121 TTTESTNSNT NATTTESTNS STNATTTASI NVRTSATTTE STNSNTSATT TESTDSNTSA 180
  181 TTTESTDSNT SATTTASTNS STNATTTAST NSSTNATTTE STNASAKEDA NKDGNAEDNR 240
  241 FHPVTDINKE SYKRKGSQMV LLERKKLKAQ FPNTSENMNV LQFLGFRSDE IKHLFLYGID 300
  301 IYFCPEGVFT QYGLCKGCQK MFELCVCWAG QKVSYRRMAW EALAVERMLR NDEEYKEYLE 360
  361 DIEPYHGDPV GYLKFFSVKR GEIYSQIQRN YAWYLAITRR RETISVLDST RGKQGSQVFR 420
  421 MSGRQIKELY YKVWSNLRES KTEVLQYFLN WDEKKCREEW EAKDDTVFVE ALEKVGVFQR 480
  481 LRSMTSAGLQ GPQYVKLQFS RHHRQLRSRY ELSLGMHLRD QLALGVTPSK VPHWTAFLSM 540
  541 LIGLFYNKTF RQKLEYLLEQ ISEVWLLPHW VDLANVEVLA ADNTRVPLYM LMVAVHKELD 600
  601 SDDVPDGRFD IILLCRDSSR EVGE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..375] ORFEUS 14.64 Sec24
    2 View Details [376..624] ORFEUS 7.85 Monomeric isocitrate dehydrogenase


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle