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Protein Overview: YHR054C

General Information:
Name(s) found: YHR054C [SGD]
Description(s) found:
Found 24 descriptions.
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  • Putative protein of unknown function [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 354 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPAAENLSP IPASIDTNDI PLIANDLKLL ETQAKLINIL QGVPFYLPVN LTKIESLLET  60
   61 LTMGVSNTVD LYFHDNEVRK EWKDTLNFIN TIVYTNFFLF VQNESSLSMA VQHSSNNNKT 120
  121 SNSERCAKDL MKIISNMHIF YSITFNFIFP IKSIKSFSSG NNRFHSNGKE FLFANHFIEI 180
  181 LQNFIAITFA IFQRCEVILY DEFYKNLSNE EINVQLLLIH DKILEILKKI EIIVSFLRDE 240
  241 MNSNGSFKSI KGFNKVLNLI KYMLRFSKKK QNFARNSDNN NVTDYSQSAK NKNVLLKFPV 300
  301 SELNRIYLKF KEISDFLMER EVVQRSIIID KDLESDNLGI TTANFNDFYD AFYN

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) GDS1 GEP5 IRC19 PET130 RPM2 RRG1 RRG8 YHR054C

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run ASF1 3912: TAP-tagged, strain background includes hpc2(delta) Green EM, et al (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen YDR132C YHR054C 2 Unpublished Fields Lab Data
    View Screen BUR2 YHR054C 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..354] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.72

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle