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View Structure Prediction Details

Protein: YHR054C
Organism: Saccharomyces cerevisiae
Length: 354 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YHR054C.

Description E-value Query
Range
Subject
Range
RSC30 - Component of the RSC chromatin remodeling complex; non-essential gene required for regulation of rib...
RSC30_YEAST - Chromatin structure-remodeling complex protein RSC30 OS=Saccharomyces cerevisiae (strain ATCC 204508...
0.0 [1..354] [530..883]

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Predicted Domain #1
Region A:
Residues: [1-354]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPAAENLSP IPASIDTNDI PLIANDLKLL ETQAKLINIL QGVPFYLPVN LTKIESLLET  60
   61 LTMGVSNTVD LYFHDNEVRK EWKDTLNFIN TIVYTNFFLF VQNESSLSMA VQHSSNNNKT 120
  121 SNSERCAKDL MKIISNMHIF YSITFNFIFP IKSIKSFSSG NNRFHSNGKE FLFANHFIEI 180
  181 LQNFIAITFA IFQRCEVILY DEFYKNLSNE EINVQLLLIH DKILEILKKI EIIVSFLRDE 240
  241 MNSNGSFKSI KGFNKVLNLI KYMLRFSKKK QNFARNSDNN NVTDYSQSAK NKNVLLKFPV 300
  301 SELNRIYLKF KEISDFLMER EVVQRSIIID KDLESDNLGI TTANFNDFYD AFYN

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle