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Protein Overview: TDA3

General Information:
Name(s) found: TDA3 / YHR009C [SGD]
Description(s) found:
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  • gi|97537695|sp|P38758.2|YHG9_YEAST RecName: Full=UPF0673 membrane protein YHR009C [NCBI NR]
  • gi|6321797|ref|NP_011873.1| Putative protein of unknown function; not an essential gene; Yhr009cp [Saccharomyces cerevisiae] [NCBI NR]
  • UPF0673 membrane protein YHR009C OS=Saccharomyces cerevisiae GN=YHR009C PE=1 SV=2 [Swiss-Prot]
  • Protein of unknown function localised to cytoplasm and nucleus [mips]
  • Putative protein of unknown function; not an essential gene [SGD]
  • YHR009C, Chr VIII from 124102-125673, reverse complement [yeast_orfs2]
  • Chr VIII from 124102-125673, reverse complement [yeastorf3.fasta]
  • Chr VIII from 125673-124102, reverse complement [yeastorf5.fasta]
  • YHR009C SGDID:S0001051, Chr VIII from 125674-124103, reverse complement, Uncharacterized ORF [yeastflysequest.fasta]
  • Yhr009cp [Saccharomyces cerevisiae] [nrdb_11152004_Chlamydomonas]
  • YHR009C SGDID:S000001051, Chr VIII from 125675-124104, reverse complement, Uncharacterized ORF, "Hypothetical protein" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • YHR009C SGDID:S000001051, Chr VIII from 125675-124104, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; not an essential gene" [yeast-contam.fasta]
  • Putative protein of unknown function; not an essential gene; Yhr009cp [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Uncharacterized protein YHR009C [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • TDA3 SGDID:S000001051, Chr VIII from 125680-124109, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative oxidoreductase involved in late endosome to Golgi transport; physical and genetical interactions with Btn2p; null mutant is viable, has extended S phase, and sensitive to expression of top1-T722A allele; similar to human FOXRED1" [yeast-030211-contam.fasta]
  • TDA3 SGDID:S000001051, Chr VIII from 125680-124109, Genome Release 64-2-1, reverse complement, Verified ORF, "Putative oxidoreductase involved in late endosome to Golgi transport; physical and genetical interactions with Btn2p; null mutant is viable, has extended S phase, and sensitive to expression of top1-T722A allele; similar to human FOXRED1" [20141208_orf_trans.fasta]
  • YHR009C SGDID:S000001051, Chr VIII from 125680-124109, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative oxidoreductase involved in late endosome to Golgi transport; physical and genetical interactions with Btn2p; null mutant is viable, has extended S phase, and sensitive to expression of top1-T722A allele; similar to human FOXRED1" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 523 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEDFMHPPF QTYPSKNSEG KKHIVIVGGG IIGCCTAYYL TQHPSFSPST HHITIIESRR  60
   61 IAGGASGKAG GLLASWAFPH QIVPLSFQLH QELSDEYDGE NNWDYRRLTT VSLEADVREE 120
  121 VIENYERLSK KAYNLNVPPP KKRPGYISNK FNIGDSNSSL SSSGSSLKND SASNEEEGSD 180
  181 IHVSSSVPSL HSLTNERMRS HTNSASDLDS VSPVEQLRET NIHNPLPADL DWIRRELVND 240
  241 WSSLGGTDTT AQLHPYKFTH FILSKAMETG AVDLLLGKVV GLKCDEMDCV HSLKYLPSVV 300
  301 KNRRNSRGHA ENPDIKLGTI FNDENAKPIE INDIQQIVLS MGPWTSKILK DCPISGLRAH 360
  361 SVTIKPSEKT VSPYAILAEL KVNDREFFSP EMYARKDEVY VCGEGDTLVN IPESSDDVEV 420
  421 VSEKCDELYH YVSKLSPTLS KGHLLRKQAC FLPVLNVPTS SGPLIGETNV KDLYIASGHS 480
  481 CWGINNAPAT GKLMAEILLD GEATSAEISS LDPKLYFDAT ILS

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) AIM2 CDC33 RTF1 SPT7 TDA3 YDL025C YGR016W

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data TDA3 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164]
    [264..363]    		 PSI-BLAST 9.0 L-aminoacid oxidase
    2 View Details [165..263] PSI-BLAST 9.0 L-aminoacid oxidase
    3 View Details [364..523] PSI-BLAST 30.69897 Sarcosine oxidase


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle