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Protein Overview: YGR071C

General Information:
Name(s) found: YGR071C [SGD]
Description(s) found:
Found 26 descriptions.
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  • Putative protein of unknown function; deletion mutant has increased glycogen accumulation and displays elongated buds; green fluorescent protein (GFP)-fusion protein localizes to the nucleus [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 860 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTALDDLHG DLVTLEDNEI INNSDHSSSH STSHEEEDEE EDDTEDIELI EKDGNKILSS  60
   61 RIHPEDEIIN DGLNIWIPVQ MLKKNIAKFW SHFLAIEKKL TKVKCKHCGE ILTRSDASLT 120
  121 KTFRSHLKTK HNISANKNFY SMNFTVGDSN LKNNTSSTEI TRRHGYDSLT FNSDQSFKCF 180
  181 DIGKLQSSNY LSISQLVAIV IASENLPLNF FENVSFKSLL SKFHRIPPLT TNIIEESIIG 240
  241 LSKSIDELIR RSISRNDTQL PFTIHLSDSK ESNQPLYLKY SREIRAQLSN LDLSHLISVN 300
  301 FTELAGKRSL FSLQLFDNTN KVSKGLPLSI FVRKTTDIDI SVWQEQLNNL YSKYPGLQKS 360
  361 VISITLPQSH YTMVLENRNS HNFTFHSGSV REIKYHTCIV SELLHCFLQP LFNVPTESML 420
  421 SSFSVAKENH SGGSLLDSLI DFSHIDLSST ILGKICCLIE EVNLNDSLKS DFLLYCQNYT 480
  481 QPNCNELTSI LSCNCDRFSA LKSILEKFAN LVPFFKSINS HLENESLSES DFRLINTVEE 540
  541 TLRTFEQSIE YFASSAPLKF THTLVFIIKF ELYLTEIIRS FKFTKSKKPF EKILARLLKV 600
  601 KDLYLLDDVN LIGAFLYPSI FQSKSLLNEI FGTTSVNKIV HNMTKIVLRY LKNFINITNF 660
  661 RSSNSGGESG RNSGNNLLSD YEAIFMKESR DVELLCNTKL TAPLTEDSLL VQIIRDDLLR 720
  721 YVNRIAHELP NAYHDYLNDN DISFDGSHFT KHELSEENDS NSGEWCLNPM EETFDIHIPI 780
  781 SDSIWNNYIS SKNKIEVIDI LLQLLSVNST SSIRSELSSL TANQDFSTKL SEETIKIKLL 840
  841 NSQFNLEKIN FHSGSIFDAC

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) TBF1 VID22 YGR071C
    View Details Krogan NJ, et al. (2006) TBF1 VID22 YGR071C

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #13 Mitotic Prep2-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YGR071C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..72] deduced N/A No confident structure predictions are available.
    2 View Details [73..152] Pfam 13.508638 BED zinc finger No confident structure predictions are available.
    3 View Details [153..455] ORFEUS 7.13 CBP80, 80KDa nuclear cap-binding protein
    4 View Details [456..656] ORFEUS 7.13 CBP80, 80KDa nuclear cap-binding protein
    5 View Details [657..736] ORFEUS 7.28 Phoshoinositide 3-kinase (PI3K) helical domain; Phoshoinositide 3-kinase (PI3K); Phoshoinositide 3-kinase (PI3K), catalytic domain
    6 View Details [737..860] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • nuclease activity
    		•  0.684822695593649 bayes_pls_golite062009
  • catalytic activity
    		•  0.402379787166751 bayes_pls_golite062009
  • hydrolase activity
    		•  0.253454833507999 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.223965050767284 bayes_pls_golite062009
  • binding
    		•  0.0417104526044634 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle