YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPP41

General Information:
Name(s) found: SPP41 / YDR464W [SGD]
Description(s) found:
Found 25 descriptions.
SHOW ALL
  • Protein involved in negative regulation of expression of spliceosome components PRP4 and PRP3 [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 1435 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Biological Process: negative regulation of transcription from RNA polymerase II promoter [IGILink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYDEDDGEI NFNELVGNLL SSHNQEGQEE GEVQGGEQEG DDFEKIYPTS ENIEPKHPDD  60
   61 SQHMHNSPDQ NIEIPHFVDE EDELVSVVAN AVQNIDDEQA KPENHLENGS EHVTSDTADD 120
  121 NHEKEQQQEW AHILQQEILK SDGEPLRENT ERRVSTSQHH PSQRTDDALD QDDENLRMAI 180
  181 LESLQELNTN EEEEKEPEKH EHAAPNDKLS SKKSSKKKKK DKSKNRESSK DKSSKKSKSS 240
  241 SHSKKHAKDR NKEKQSKPTN NENTLDLSNI LENLIHENDN AAIDTAKQTV DIQDNSHTDN 300
  301 TNNEDVEAQA LVEATLKAFE NELLSSAPTE EPSQEQSIGP VSSRKAVEPP RKPTADDIPL 360
  361 AMLQAFKPKK RPPQEKKKTK SKTSKAASTA NKSPASESTS KKKKKKKTVK ESNKSQEAYE 420
  421 DDEFSRILAD MVNQVVNTSL KETSTHTATQ DNKLESESDF TSPVQSQYTT EDASTANDDS 480
  481 LDLNQIMQNA MAMVFQNQND DEFDENIVED FNRGLGDLSV SDLLPHDNLS RMEKKSVPKS 540
  541 SSKSEKKTAI SRRASKKASR DASSVELTEV PSKPKKPSKT EVSLEKKLRK KYVSIANEAA 600
  601 SVARKKRWAK NKELKEKEKL ERQTAREERR HKKKLEKQRL AEEQEELKKI VERGPPYPPD 660
  661 LRLTKSGKPK KPYRRWTPEE LLKRSQEAEK PRKVKKERKK KEKKMKVPSS ALKKIPLFNF 720
  721 VKGNVQPSAR HRLNDIEGSL STIGLHKSPD GVRRILSRPK SEDHEWPLSD SSASQNYDAH 780
  781 LKTVVHKEKI PFHPPWTIPS QPPFALPVAR RKKIPNIKKY RKRTNNSFRV SKEGTASTRN 840
  841 RILPAILLPI INTLKAAAKS QTAAGATPEE ARKRLATIIQ HAKSTVIRAA LQARKNSMQA 900
  901 AHSKGTTTEL ATTASRMKNP LKMIPIFNTS RVKQQLDKQL PARSAGTEIS SSESPDKATP 960
  961 DPHSNSTIAG HTLKGVTTPI KIEDSDANVP PVSIAVSTIE PSQDKLELTK RAESVEPVEN1020
 1021 NVETAKETQS VQEIKENVGT KASEEVTLTE DKTNGDPKNE KRILIESPVE KTDKKKPGEK1080
 1081 IATDLNEDAS LSDKKDGDEK STLHSDAAQL TGNEPDSVNT TTGKPKLIDV SLKPLNEAKP1140
 1141 KIPIIFPLKR PQIKPEVSVI NLVQNLVNTK IPEIKNESVD LGSNITDILS STITNILPEI1200
 1201 TATDVKNYQY EDENVKYLKK TPRQVLNLDG LVPPSGRCIT KAKRVRRIKK LSADATTAPE1260
 1261 ADGKANSESI TYTFDIPSPE EVQSKRSVVL KFAKARLTEA ELSCLKKEIN NVRKRRWREM1320
 1321 NSTKNWEYDV KSRLKKRANA FFGEGESETK SKWIEERFQE KVSQEKYKDR LETTETQANN1380
 1381 TKIVIDDKEI LNILAVNMNN LNKARCIEKD IQESFREEKL ASLQPKKKRK KSILH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
    View Run MLP2 #26 Asynchronous Prep4-TiO2 Phosphopeptide enriched, Steps1-2 Keck JM, et al. (2011)
    View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #30 Asynchronous Prep6-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
    View Run MLP2 #11 Mitotic Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data SPP41 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..619] MSA 5.162998 View MSA. No confident structure predictions are available.
    2 View Details [620..1210] MSA 20.271997 View MSA. No confident structure predictions are available.
    3 View Details [1211..1262] deduced N/A Confident ab initio structure predictions are available.
    4 View Details [1263..1435] MSA 1.010962 View MSA. No confident structure predictions are available.
    5 View Details [580..664] deduced N/A No confident structure predictions are available.
    6 View Details [665..875] deduced N/A No confident structure predictions are available.
    7 View Details [876..983] deduced N/A No confident structure predictions are available.
    8 View Details [984..1201] MSA 1.359996 View MSA. No confident structure predictions are available.
    9 View Details [1202..1435] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle