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Protein Overview: NKP1

General Information:
Name(s) found: NKP1 / YDR383C [SGD]
Description(s) found:
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  • gi|927316|gb|AAB64825.1| Ydr383cp; CAI: 0.11 [Saccharomyces cerevisiae] [NCBI NR]
  • gi|849204|gb|AAB64819.1| Ydr383cp [Saccharomyces cerevisiae] [NCBI NR]
  • pir||S61178 hypothetical protein YDR383c - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • weak similarity to S.pombe paramyosin [mips]
  • Non-essential kinetochore protein, subunit of the Ctf19 central kinetochore complex (Ctf19p-Mcm21p-Okp1p-Mcm22p-Mcm16p-Ctf3p-Chl4p-Mcm19p-Nkp1p-Nkp2p-Ame1p-Mtw1p) [SGD]
  • YDR383C, Chr IV from 1239949-1240707, reverse complement [yeast_orfs2]
  • Chr IV from 1239949-1240707, reverse complement [yeastorf3.fasta]
  • Chr IV from 1239948-1240706, reverse complement [yeastorf4.fasta]
  • >Q12493 (Q12493) Chromosome IV COSMID 9481 [4932.FASTACCERV.txt]
  • Ydr383cp [Saccharomyces cerevisiae]gi|2131458|pir||S61178 hypothetical protein YDR383c - yeast (Saccharomyces cerevisiae)gi|927316|gb|AAB64825.1| Ydr383cp; CAI: 0.11 [Saccharomyces cerevisiae] [nrdb_11152004_Chlamydomonas]
  • (Q12493) Ydr383cp [cerv4932.FASTAC]
  • Ydr383cp [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Ydr383cp; CAI: 0.11 [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • [YS9_six.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 252 amino acids

    Gene Ontology:
    Cellular Component: kinetochore [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCTETKATID CRNKMTDTYN SISNFIENEL TALLSSDDYL MDDLAGELPN EVCRLLKAQV  60
   61 IEKRKDAMSR GKQDLLSKEI YDNESELRAS QSQQIMELVG DIPKYSLGSE LRNRVEGEPQ 120
  121 STSIERLIED VLKLPQMEVA DEEEVEVEND LKVLSEYSNL RKDLILKCQA LQIGESKLSD 180
  181 ILSQTNSINS LTTSIKEASE DDDISEYFAT YNGKLVVALE EMKLLLEEAV KTFGNSPEKR 240
  241 EKIKKILSEL KK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run CHL4 No Comments Cheeseman IM, et al. (2002)
    View Run MCM16 No Comments Cheeseman IM, et al. (2002)
    View Run NSL1 No Comments Hazbun TR, et al. (2003)
    View Run NSL1 No Comments Hazbun TR, et al. (2003)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..252] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle