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View Structure Prediction Details

Protein: NKP1
Organism: Saccharomyces cerevisiae
Length: 252 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NKP1.

Description E-value Query
Range
Subject
Range
gi|60491536, gi|... - gi|60680102|ref|YP_210246.1| putative two-component sensor histidine kinase [Bacteroides fragilis NC...
gi|18033127 - gi|18033127|gb|AAL56997.1|AF329100_4 FrrD [Bacteroides fragilis]
0.003 [29..240] [250..423]

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Predicted Domain #1
Region A:
Residues: [1-252]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCTETKATID CRNKMTDTYN SISNFIENEL TALLSSDDYL MDDLAGELPN EVCRLLKAQV  60
   61 IEKRKDAMSR GKQDLLSKEI YDNESELRAS QSQQIMELVG DIPKYSLGSE LRNRVEGEPQ 120
  121 STSIERLIED VLKLPQMEVA DEEEVEVEND LKVLSEYSNL RKDLILKCQA LQIGESKLSD 180
  181 ILSQTNSINS LTTSIKEASE DDDISEYFAT YNGKLVVALE EMKLLLEEAV KTFGNSPEKR 240
  241 EKIKKILSEL KK

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle