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Protein Overview: RKM4

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data RKM4 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..281] MSA 19.062997 View MSA. No confident structure predictions are available.
2 View Details [282..494] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • histone methyltransferase activity
  • 6.20878333364554 bayes_pls_golite062009
  • protein methyltransferase activity
  • 6.08778683840554 bayes_pls_golite062009
  • lysine N-methyltransferase activity
  • 5.45106430536252 bayes_pls_golite062009
  • protein-lysine N-methyltransferase activity
  • 5.45106430536252 bayes_pls_golite062009
  • histone-lysine N-methyltransferase activity
  • 5.45106430536252 bayes_pls_golite062009
  • N-methyltransferase activity
  • 3.98411678860954 bayes_pls_golite062009
  • histone methyltransferase activity (H3-K9 specific)
  • 3.54138873512018 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
  • 2.69428385009711 bayes_pls_golite062009
  • methyltransferase activity
  • 2.33114816345072 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
  • 2.25175257044903 bayes_pls_golite062009
  • binding
  • 1.67469558504376 bayes_pls_golite062009
  • nucleic acid binding
  • 1.29511015534184 bayes_pls_golite062009
  • protein binding
  • 1.07532079834012 bayes_pls_golite062009
  • transferase activity
  • 0.653108419761009 bayes_pls_golite062009
  • chromatin binding
  • 0.628375771647179 bayes_pls_golite062009
  • catalytic activity
  • 0.414641636618101 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle