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Protein Overview: YDL177C

General Information:
Name(s) found: YDL177C [SGD]
Description(s) found:
Found 33 descriptions.
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  • Putative protein of unknown function; similar to the mouse IMPACT gene; YDL177C is not an essential gene [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 170 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKNVGKLVK IWNESEVLVD RKSKFQARCC PLQNQKDIPS ILQELTQNNK SVSKASHMHM  60
   61 YAWRTAEVSN NLHLQQEQKK KGNKANKSNN SHVNKSRNIT VQPKNIEQGC ADCGEAGAGQ 120
  121 RLLTLLERAN IFNVLVIVTR WYGGTPLGSS RFRHISTCAV ETLKKGGFLP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..170] Pfam 60.744727 Uncharacterized protein family UPF0029 No confident structure predictions are available.
    2 View Details [58..170] PSI-BLAST 36.0 Crystal structure of a conserved hypothetical protein TT1547 from thermus thermophilus HB8

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.112026646106867 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle