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Protein Overview: PET18

General Information:
Name(s) found: PET18 / YCR020C [SGD]
Description(s) found:
Found 29 descriptions.
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  • Protein of unknown function, has weak similarity to proteins involved in thiamin metabolism; expression is induced in the absence of thiamin [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 215 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    Biological Process: thiamin metabolic process [IEPLink to PubMed article]
    mitochondrion organization [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCTTDKLIQ KYDALVRKTT EHKFAKELCA GTLKDRSLYI YLSQDLQFFE TSLRLICKTT  60
   61 SLAPTTHALI TLAKKIGFFS NDENSYFHDC LELLAPSLTK EERDNFDNKA IPGVDAYINF 120
  121 LDELRKDASI TWPSLVTSLW VAEELYWRWA RDTPRAPGLH WKYQKWIDLH DGEHFQTWCE 180
  181 FLKAEVDKFP VEEVESIFVK VSQFEFEFFE SCYNA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data PET18 Huh WK, et al. (2003)

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112]
    [157..176]    		 ORFEUS 9.12 Ribonucleotide reductase R2
    2 View Details [113..156]
    [177..215]    		 ORFEUS 9.12 Ribonucleotide reductase R2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.01565615669193 bayes_pls_golite062009
  • protein binding
    		•  0.645601172247564 bayes_pls_golite062009
  • catalytic activity
    		•  0.476060647762462 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle