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Protein Overview: YCL074W

General Information:
Name(s) found: YCL074W [SGD]
Description(s) found:
Found 12 descriptions.
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  • Pseudogene: encodes fragment of Ty Pol protein [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 308 amino acids

    Gene Ontology:
    Cellular Component: retrotransposon nucleocapsid [ISSLink to PubMed article]
    Biological Process: transposition, RNA-mediated [ISSLink to PubMed article]
    Molecular Function: DNA-directed DNA polymerase activity [ISSLink to PubMed article]
    RNA-directed DNA polymerase activity [ISSLink to PubMed article]
    RNA binding [ISSLink to PubMed article]
    protein binding [ISSLink to PubMed article]
    ribonuclease activity [ISSLink to PubMed article]
    peptidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVDTAFLNS TMDEPIYVKQ PPGFVNERNP DYVWELYGGM YGLKQAPLLW NEHINNTLKK  60
   61 IGFCRHEGEH GLYFRSTSDG PIYIAVYVDD LLVAAPSPKI YDRVKQELTK LYSMKDLGKV 120
  121 DKFLGLNIHQ SSNGDITLSL QDYIAKAASE SEINTFKLTQ TPLCNSKPLF ETTSPHLKDI 180
  181 TPYQSIVGQL LFCANTGRPD ISYPVSLLSR FLREPRAIHL ESARRVLRYL YTTRSMCLKY 240
  241 RSGSQLALTV YCDASHGAIH DLPHSTGGYV TLLAGAPVTW SSKKLKGVIP VPSTEAEYIT 300
  301 ASETVMEI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..4]
    [53..136]    		 ORFEUS 7.97 No description for 1c9rA was found.
    2 View Details [5..52]
    [137..308]    		 ORFEUS 7.97 No description for 1c9rA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.455736130840876 bayes_pls_golite062009
  • transferase activity
    		•  0.1348265745695 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.0290819848545603 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle