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Protein Overview: SAF1

General Information:
Name(s) found: SAF1 / YBR280C [SGD]
Description(s) found:
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  • pir||S44542 probable membrane protein YBR280c - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|586393|sp|P38352|YB9W_YEAST Hypothetical 71.1 kDa protein in PAF1-MRPL27 intergenic region [NCBI NR]
  • gi|536724|emb|CAA85244.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • gi|429125|emb|CAA53643.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • gi|1587538|prf||2206494F ORF YBR2017 [NCBI NR]
  • (P38352) Hypothetical 71.1 kDa protein in PAF1-MRPL27 intergenic region [Swiss-Prot]
  • similarity to hypothetical protein S. pombe [mips]
  • F-Box protein involved in proteasome-dependent degradation of Aah1p during entry of cells into quiescence; interacts with Skp1 [SGD]
  • YBR280C, Chr II from 762741-764669, reverse complement [yeast_orfs2]
  • Chr II from 762741-764669, reverse complement [yeastorf3.fasta]
  • Chr II from 762740-764668, reverse complement [yeastorf4.fasta]
  • unnamed protein product [Saccharomyces cerevisiae]gi|536724|emb|CAA85244.1| unnamed protein product [Saccharomyces cerevisiae]gi|586393|sp|P38352|YB9W_YEAST Hypothetical 71.1 kDa protein in PAF1-MRPL27 intergenic regiongi|626248|pir||S44542 probable me [nrdb_11152004_Chlamydomonas]
  • unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • ORF YBR2017 [nr-271106-contam.fasta]
  • [YS9_six.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 642 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: proteasomal ubiquitin-dependent protein catabolic process [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKHIMSEVE SREKEPDAGL SPDIVQATLP FLSSDDIKNL SQTNKYYNTL LDFDHSKILW  60
   61 HELFHKAFGT LKTNDEPFQG RNSAEFKTCT ETILREAFPT LSWQEVYQLR AYDAKFYSWG 120
  121 YLKHGRLGYT ASSNNELVAT SLNGPSPRFK YGVNTPTEVP WFNSRTTSRT SNFTPSEDPL 180
  181 SAIKKDGDEI IAQVSSGGFS FQILTESGNL YSSGSTFSGG LKGPGPSGSQ HDYNPFREMI 240
  241 HNMERSYPRI TSRSNGSTVN TTGTFSGRRM SGSHPSTAYE PGNATTAQHI TIDSGGAPAA 300
  301 SPGGSHSGVP RTTMPSMGPH ENIYSQIEML ERSANKAVPG NNHIRRMFAR NSFPLYSGRD 360
  361 ENLGSFNDIQ FVAVSSGRSH FLAMDTDNNI YSWDSTESDQ GVKIEFANLP SRATNPILKI 420
  421 ASGWNFNCCY IYKVGLVAWK ERDAIQKGES FAFAKYEIVP NTNDVNGDSR IVDFACLQDN 480
  481 CVFFINNNGD KLWKYHNGLN QIVDLNIVGK LCKINACFAS LVLFTDTHCY TLKVTNGDVD 540
  541 KDSLTELDIN ENVISVASGD YHTVALTERG HLYSWGIESQ DCGCLGLGPS EKIVNELHIG 600
  601 NWEGQRNIRV VKPTKIELPE DYICVSVTAG GWQTGALIIK KH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..287] deduced N/A No confident structure predictions are available.
    2 View Details [288..642] PSI-BLAST 75.68867 Regulator of chromosome condensation RCC1


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle