Proteasome- and SCF-dependent degradation of yeast adenine deaminase upon transition from proliferation to quiescence requires a new F-box protein named Saf1p

Mol Microbiol. 2006 May;60(4):1014-25. doi: 10.1111/j.1365-2958.2006.05153.x.

Abstract

In response to nutrient limitation, Saccharomyces cerevisiae cells enter into a non-proliferating state termed quiescence. This transition is associated with profound changes in gene expression patterns. The adenine deaminase encoding gene AAH1 is among the most precociously and tightly downregulated gene upon entry into quiescence. We show that AAH1 downregulation is not specifically due to glucose exhaustion but is a more general response to nutrient limitation. We also found that Aah1p level is tightly correlated to RAS activity indicating thus an important role for the protein kinase A pathway in this regulation process. We have isolated three deletion mutants, srb10, srb11 and saf1 (ybr280c) affecting AAH1 expression during post-diauxic growth and in early stationary phase. We show that the Srb10p cyclin-dependent kinase and its cyclin, Srb11p, regulate AAH1 expression at the transcriptional level. By contrast, Saf1p, a previously uncharacterized F-box protein, acts at a post-transcriptional level by promoting degradation of Aah1p. This post-transcriptional regulation is abolished by mutations affecting the proteasome or constant subunits of the SCF (Skp1-Cullin-F-box) complex. We propose that Saf1p targets Aah1p for proteasome-dependent degradation upon entry into quiescence. This work provides the first direct evidence for active degradation of proteins in quiescent yeast cells.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aminohydrolases / genetics
  • Aminohydrolases / metabolism*
  • Cell Proliferation
  • Cyclic AMP / metabolism
  • Cyclin-Dependent Kinase 8
  • Cyclin-Dependent Kinases / genetics
  • Cyclin-Dependent Kinases / metabolism
  • Cyclins
  • Down-Regulation
  • F-Box Proteins / genetics
  • F-Box Proteins / physiology*
  • Gene Expression Regulation, Enzymologic
  • Gene Expression Regulation, Fungal
  • Mutation
  • Proteasome Endopeptidase Complex / genetics
  • Proteasome Endopeptidase Complex / physiology*
  • SKP Cullin F-Box Protein Ligases / genetics
  • SKP Cullin F-Box Protein Ligases / physiology*
  • Saccharomyces cerevisiae / enzymology*
  • Saccharomyces cerevisiae / genetics
  • Saccharomyces cerevisiae Proteins / genetics
  • Saccharomyces cerevisiae Proteins / metabolism
  • Saccharomyces cerevisiae Proteins / physiology*
  • Sequence Deletion
  • Transcription Factors
  • Transcription, Genetic
  • ras Proteins / metabolism

Substances

  • Cyclins
  • F-Box Proteins
  • Saccharomyces cerevisiae Proteins
  • Saf1 protein, S cerevisiae
  • Transcription Factors
  • Cyclic AMP
  • SKP Cullin F-Box Protein Ligases
  • SSN8 protein, S cerevisiae
  • Cyclin-Dependent Kinase 8
  • Cyclin-Dependent Kinases
  • SSN3 protein, S cerevisiae
  • Proteasome Endopeptidase Complex
  • Aminohydrolases
  • adenine deaminase
  • ras Proteins