YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: YHR213W, YAR062W

General Information:
Name(s) found: YHR213W [SGD]
YAR062W [SGD]
Description(s) found:
Found 39 descriptions.
SHOW ALL
  • Possible pseudogene; has similarity to Flo1p, which is a lectin-like protein involved in flocculation [SGD]
  • Pseudogene with similarity to Flo1p, which is a lectin-like protein involved in flocculation [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 198 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGYFLPPQT SSYTFRFAKV DDSAILSVGG NVAFECCAQE QPPITSTDFT INGIKPWQGS  60
   61 LPDNIGGTVY MYAGYYYPLK VVYSNAVSWG TLPISVELPD GTTVSDDFEG YVYSFDDDLS 120
  121 QSNCTIPDPS KHTTSIVTTT TELWTGTFTS TSTEMTTVTG TNGQPTDETV IVAKAPTTAT 180
  181 SSSLSSSSSE QITSSITS

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) ILV2 PEX19 YDR053W YHR213W, YAR062W

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] Pfam 11.275724 No description for PF07691.3 was found. No confident structure predictions are available.
    2 View Details [116..198] MSA 1.021992 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle