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Protein Overview: gi|19113048

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..90] MSA 2.171995 View MSA. No confident structure predictions are available.
2 View Details [91..331] PSI-BLAST 49.39794 Eukaryotic initiation factor eIF4G
3 View Details [332..628] FFAS03 2.68 CBP80, 80KDa nuclear cap-binding protein

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • RNA binding
  • 4.20683443264388 bayes_pls_golite062009
  • mRNA binding
  • 2.49094746544717 bayes_pls_golite062009
  • binding
  • 2.47395644967726 bayes_pls_golite062009
  • nucleic acid binding
  • 1.64539435934931 bayes_pls_golite062009
  • structural molecule activity
  • 1.39201458088376 bayes_pls_golite062009
  • transcription regulator activity
  • 1.06250847754412 bayes_pls_golite062009
  • protein binding
  • 1.04044934052933 bayes_pls_golite062009
  • DNA binding
  • 0.946847037737779 bayes_pls_golite062009
  • RNA cap binding
  • 0.66277586901495 bayes_pls_golite062009
  • transcription factor activity
  • 0.362911773502049 bayes_pls_golite062009
    3
    Term Confidence Notes
  • RNA binding
  • 4.05046860305563 bayes_pls_golite062009
  • binding
  • 2.36800795249393 bayes_pls_golite062009
  • mRNA binding
  • 2.35042158577052 bayes_pls_golite062009
  • nucleic acid binding
  • 1.59410102249793 bayes_pls_golite062009
  • structural molecule activity
  • 1.3916221897201 bayes_pls_golite062009
  • transcription regulator activity
  • 1.08645493064764 bayes_pls_golite062009
  • DNA binding
  • 0.956143892328242 bayes_pls_golite062009
  • protein binding
  • 0.914877292844892 bayes_pls_golite062009
  • transcription factor activity
  • 0.371244009721798 bayes_pls_golite062009
  • RNA cap binding
  • 0.357520253345298 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle