Protein Overview: gi|62471446, gi|...

General Information:
Name(s) found:	gi\|66730439 [NCBI NR] gi\|62471446 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|66730439\|ref\|NP_001019439.1\| DNA ligase I isoform 1 [Rattus norvegicus] [NCBI NR] gi\|62471446\|gb\|AAH93604.1\| Ligase I, DNA, ATP-dependent [Rattus norvegicus] [NCBI NR] Tax_Id=10116 Ligase I, DNA, ATP-dependent [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] ligase I, DNA, ATP-dependent isoform 1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Ligase I, DNA, ATP-dependent [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Lig1 DNA ligase [rat-ipi-250309-contam.fasta] DNA ligase OS=Rattus norvegicus GN=Lig1 [011711_HMR.fasta] Isoform of Q9JHY8, DNA ligase OS=Rattus norvegicus GN=Lig1 PE=1 SV=1 [RAT.fasta.20160308]
Organism:	Rattus norvegicus
Length:	913 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA] cellular_component [ND] nucleoplasm [UNKNOWN]
Biological Process:	[NOT]V(D)J recombination [UNKNOWN] cell division [IEA] [NOT]DNA repair [UNKNOWN][IDA][IEA] DNA replication [UNKNOWN][IEA] DNA recombination [IEA] nucleotide-excision repair, DNA gap filling [UNKNOWN] cell cycle [IEA]
Molecular Function:	nucleotide binding [IEA] DNA binding [IEA] ATP binding [IEA] DNA ligase (ATP) activity [IEA] metal ion binding [IEA] DNA ligase activity [UNKNOWN][IDA] ligase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRSIMSFFQ PTTTEGKAKK PEKEIPSSIR EKEPPPKVAL KERNRAVPES DSPVKRPGRK  60
   61 VAQVLSSEGE DEDEAPGTPQ VQKPVSDSKQ SSPPSPDSCP ENSSPSMDIS PSGFPKRRTA 120
  121 RKQLPKRTIQ DTLEEHNEDK DKAAKKRKKE DTQTPTESLT EAEEVKQKEE QVEDQPTVPP 180
  181 EPTESPESVT LTKTENIPMC KAGVKQKPQE EEQSKPPARG AKPLSSFFTP RKPAVKTEVK 240
  241 QEESDTPRKE ETKGAPDPTN YNPSKSNYHP IEDACWKHGQ KVPFLAVART FEKIEEVSAR 300
  301 LKMVETLSNL LRSVVALSPT DLLPVLYLSL NRLGPPQQGL ELGVGDGVLL KAVAQATGRQ 360
  361 LESIRAEVAE KGDVGLVAEN SRSTQRLMLP PPPLTVSGVF TKFCDIARLT GSASMAKKMD 420
  421 IIKGLFVACR YSEARFIARS LSGRLRLGLA EQSVLAALAQ AVSLTPPGQE FPTAVVDAGK 480
  481 GKTAEARKMW LEEQGMILKQ TFCEVPDLDR IIPVLLEHGL ESLPEHCKLS PGVPLKPMLA 540
  541 HPTRGVREVL KRFEEVDFTC EYKYDGQRAQ IHVLEGGEVK IFSRNQEDNS GKYPDIISRI 600
  601 PKIKHPSVTS FILDTEAVAW DREKKQIQPF QVLTTRKRKE VDASEIQVQV CLYAFDLIYL 660
  661 NGESLARQPL SRRRQLLREN FVETEGEFVF ATSLDTKDIE QIAEFLEQSV KDSCEGLMVK 720
  721 TLDVDATYEI AKRSHNWLKL KKDYLEGVGD TLDLVVIGAY LGRGKRAGRY GGFLLAAYDE 780
  781 ESEELQAICK LGTGFSDEEL EEHHQSMQAL LLPTPRPYVR IDGAVAPDHW LDPSVVWEVK 840
  841 CADLSLSPIY PAARGLVDKE KGISLRFPRF IRVREDKQPE QATTSDQVAS LYRKQSQIQN 900
  901 QQSSDLDSDV EDY

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.92

Protein Overview: gi|62471446, gi|...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: