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Protein Overview: Atg12-PB

General Information:
Name(s) found: Atg12-PB / FBpp0289288 [FlyBase]
Description(s) found:
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  • gi|66771003|gb|AAY54813.1| IP05405p [Drosophila melanogaster] [NCBI NR]
  • gi|66770957|gb|AAY54790.1| IP05205p [Drosophila melanogaster] [NCBI NR]
  • gi|251757485|sp|Q9VTU1.3|APG12_DROME RecName: Full=Autophagy protein 12-like; Short=APG12-like [NCBI NR]
  • gi|221331104|ref|NP_648551.3| Autophagy-specific gene 12 [Drosophila melanogaster] [NCBI NR]
  • gi|220902565|gb|AAF49955.4| Autophagy-specific gene 12 [Drosophila melanogaster] [NCBI NR]
  • Autophagy protein 12-like OS=Drosophila melanogaster GN=Atg12 PE=3 SV=3 [Swiss-Prot]
  • The gene Autophagy-specific gene 12 is referred to in FlyBase by the symbol Dmel\Atg12 (CG10861, FBgn0036255). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:12129874..12130659. It has the cytological map location 68F5. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: autophagic cell death; autophagy; salivary gland cell autophagic cell death. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • type=protein; loc=3L:join(12130116..12130191,12130259..12130395,12130453..12130575); ID=FBpp0289288; name=Atg12-PB; parent=FBgn0036255,FBtr0300011; dbxref=FlyBase:FBpp0289288,FlyBase_Annotation_IDs:CG10861-PB,REFSEQ:NP_648551,GB_protein:AAF49955; MD5=682d [fly-100309-contam.fasta]
  • IP05405p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • IP05205p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:join(12130116..12130191,12130259..12130395,12130453..12130575); ID=FBpp0289288; name=Atg12-PB; parent=FBgn0036255,FBtr0300011; dbxref=FlyBase:FBpp0289288,FlyBase_Annotation_IDs:CG10861-PB,REFSEQ:NP_648551,GB_protein:AAF49955; MD5=682dfc99de13b571eb5865e132838586; length=111; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:join(12130116..12130191,12130259..12130395,12130453..12130575); ID=FBpp0289288; name=Atg12-PB; parent=FBgn0036255,FBtr0300011; dbxref=FlyBase:FBpp0289288,FlyBase_Annotation_IDs:CG10861-PB,REFSEQ:NP_648551,GB_protein:AAF49955; MD5=682dfc99de13b571eb5865e132838586; length=111; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=3L:join(12130116..12130191,12130259..12130395,12130453..12130575); ID=FBpp0289288; name=Atg12-PB; parent=FBgn0036255,FBtr0300011; dbxref=FlyBase:FBpp0289288,FlyBase_Annotation_IDs:CG10861-PB,REFSEQ:NP_648551,GB_protein:AAF49955,FlyMine:FBpp0289288,modMine:FBpp0289288; MD5=682dfc99de13b571eb5865e132838586; length=111; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:join(12137016..12137091,12137159..12137295,12137353..12137475); ID=FBpp0289288; name=Atg12-PB; parent=FBgn0036255,FBtr0300011; dbxref=FlyBase:FBpp0289288,FlyBase_Annotation_IDs:CG10861-PB,REFSEQ:NP_648551,GB_protein:AAF49955,FlyMine:FBpp0289288,modMine:FBpp0289288; MD5=682dfc99de13b571eb5865e132838586; length=111; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:join(12137016..12137091,12137159..12137295,12137353..12137475); ID=FBpp0289288; name=Atg12-PB; parent=FBgn0036255,FBtr0300011; dbxref=FlyBase:FBpp0289288,FlyBase_Annotation_IDs:CG10861-PB,REFSEQ:NP_648551,GB_protein:AAF49955,FlyMine:FBpp0289288,modMine:FBpp0289288; MD5=682dfc99de13b571eb5865e132838586; length=111; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0289288 type=protein; loc=3L:join(12137016..12137091,12137159..12137295,12137353..12137475); ID=FBpp0289288; name=Atg12-PB; parent=FBgn0036255,FBtr0300011; dbxref=FlyBase:FBpp0289288,FlyBase_Annotation_IDs:CG10861-PB,REFSEQ:NP_648551,GB_protein:AAF49955,FlyMine:FBpp0289288,modMine:FBpp0289288; MD5=682dfc99de13b571eb5865e132838586; length=111; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:join(12137016..12137091,12137159..12137295,12137353..12137475); ID=FBpp0289288; name=Atg12-PB; parent=FBgn0036255,FBtr0300011; dbxref=FlyBase:FBpp0289288,FlyBase_Annotation_IDs:CG10861-PB,REFSEQ:NP_648551,GB_protein:AAF49955,UniProt/Swiss-Prot:Q9VTU1,FlyMine:FBpp0289288,modMine:FBpp0289288; MD5=682dfc99de13b571eb5865e132838586; length=111; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 111 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA][NAS]
    Biological Process: autophagic vacuole assembly [IEA]
    autophagy [IMP][NAS]
    autophagic cell death [IEP]
    salivary gland cell autophagic cell death [IEP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETPESQAA LSTSSSTPAD KDGSKICILL NATGNVPIIK KRTWTVDPNK TVGWIQTFIH  60
   61 KFLKLDASEQ IFLYVNQTFA PAPDQIIKNL YECHGTNGKL VLYYCKNQAW G

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle