Protein Overview: gi|123994479, gi...

General Information:
Name(s) found:	gi\|60655947 [NCBI NR] gi\|123994479 [NCBI NR] gi\|123979684 [NCBI NR]
Description(s) found: Found 4 descriptions. SHOW ALL	gi\|60655947\|gb\|AAX32537.1\| phenylalanine-tRNA synthetase-like alpha subunit [synthetic construct] [NCBI NR] gi\|123994479\|gb\|ABM84841.1\| phenylalanine-tRNA synthetase-like, alpha subunit [synthetic construct] [NCBI NR] gi\|123979684\|gb\|ABM81671.1\| phenylalanine-tRNA synthetase-like, alpha subunit [synthetic construct] [NCBI NR]
Organism:	synthetic construct
Length:	508 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADGQVAELL LRRLEASDGG LDSAELAAEL GMEHQAVVGA VKSLQALGEV IEAELRSTKH  60
   61 WELTAEGEEI AREGSHEARV FRSIPPEGLA QSELMRLPSG KVGFSKAMSN KWIRVDKSAA 120
  121 DGPRVFRVVD SMEDEVQRRL QLVRGGQAEK LGEKERSELR KRKLLAEVTL KTYWVSKGSA 180
  181 FSTSISKQET ELSPEMISSG SWRDRPFKPY NFLAHGVLPD SGHLHPLLKV RSQFRQIFLE 240
  241 MGFTEMPTDN FIESSFWNFD ALFQPQQHPA RDQHDTFFLR DPAEALQLPM DYVQRVKRTH 300
  301 SQGGYGSQGY KYNWKLDEAR KNLLRTHTTS ASARALYRLA QKKPFTPVKY FSIDRVFRNE 360
  361 TLDATHLAEF HQIEGVVADH GLTLGHLMGV LREFFTKLGI TQLRFKPAYN PYTEPSMEVF 420
  421 SYHQGLKKWV EVGNSGVFRP EMLLPMGLPE NVSVIAWGLS LERPTMIKYG INNIRELVGH 480
  481 KVNLQMVYDS PLCRLDAEPR PPPTQEAA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..117]	FFAS03	1.6	Staphylococcal accessory regulator A homolog, SarS
2	View Details	[118..508]	PSI-BLAST	78.0	Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
transcription regulator activity	3.09413019441785	bayes_pls_golite062009
nucleic acid binding	2.8293727459515	bayes_pls_golite062009
DNA binding	2.66906990480864	bayes_pls_golite062009
binding	2.53822896550273	bayes_pls_golite062009
ligase activity	2.33035084655874	bayes_pls_golite062009
transcription factor activity	2.21460392371094	bayes_pls_golite062009
structural constituent of ribosome	0.764002516817766	bayes_pls_golite062009
structural molecule activity	0.756450227832198	bayes_pls_golite062009
sequence-specific DNA binding	0.665091289283954	bayes_pls_golite062009
protein binding	0.626618806841206	bayes_pls_golite062009
transcription activator activity	0.542530812773621	bayes_pls_golite062009
transcription repressor activity	0.423955395883599	bayes_pls_golite062009
RNA polymerase II transcription factor activity	0.0907538697485439	bayes_pls_golite062009

2

Term	Confidence	Notes
phenylalanine-tRNA ligase activity	13.8919118344182	bayes_pls_golite062009
ligase activity, forming carbon-oxygen bonds	12.5698315343202	bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds	12.5698315343202	bayes_pls_golite062009
aminoacyl-tRNA ligase activity	12.5592545638101	bayes_pls_golite062009
ligase activity	6.92073480193262	bayes_pls_golite062009
glycine-tRNA ligase activity	2.61548498770105	bayes_pls_golite062009
threonine-tRNA ligase activity	2.18642354927	bayes_pls_golite062009
serine-tRNA ligase activity	2.07594942154162	bayes_pls_golite062009
catalytic activity	1.99372273395202	bayes_pls_golite062009
alanine-tRNA ligase activity	1.82594054955281	bayes_pls_golite062009
lysine-tRNA ligase activity	1.72324031407565	bayes_pls_golite062009
histidine-tRNA ligase activity	1.72215103383322	bayes_pls_golite062009
asparagine-tRNA ligase activity	0.921492123574877	bayes_pls_golite062009
binding	0.705666054154871	bayes_pls_golite062009
aspartate-tRNA ligase activity	0.00572514744734753	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.97

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle